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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P00140_001 Banana endoplasmic reticulum, golgi 72.51 80.54
TraesCS2A01G555600.1 Wheat golgi 84.29 77.29
TraesCS2B01G587900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 84.29 77.18
TraesCS2D01G558800.1 Wheat plasma membrane 83.69 76.63
Os04t0675500-01 Rice plasma membrane 80.82 74.2
Zm00001d001846_P001 Maize plasma membrane 80.21 73.85
EES13093 Sorghum endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 80.06 73.61
Zm00001d026607_P002 Maize plasma membrane 79.61 73.19
CDY28395 Canola endoplasmic reticulum, peroxisome, plasma membrane 53.32 72.63
PGSC0003DMT400026302 Potato endoplasmic reticulum, golgi, plasma membrane 74.92 68.41
Solyc03g098600.2.1 Tomato nucleus, plastid, unclear 74.77 68.28
KRH38891 Soybean endoplasmic reticulum 74.77 67.9
KRH09394 Soybean endoplasmic reticulum, mitochondrion 74.32 67.12
CDY15314 Canola plasma membrane 73.41 67.03
CDX93729 Canola peroxisome, plasma membrane, plastid, vacuole 73.26 66.9
Bra028034.1-P Field mustard golgi, plasma membrane, plastid, vacuole 72.96 66.62
VIT_17s0053g00140.t01 Wine grape plasma membrane 73.72 65.86
AT1G34130.1 Thale cress plasma membrane 73.11 65.85
Bra034441.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 50.15 64.72
HORVU3Hr1G071140.34 Barley golgi, mitochondrion, plasma membrane, plastid 45.32 35.21
Protein Annotations
Gene3D:3.40.50.12610MapMan:35.1UniProt:A0A287JNN1GO:GO:0003674GO:GO:0003824GO:GO:0004576
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005886
GO:GO:0005975GO:GO:0006464GO:GO:0006486GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU2Hr1G119980
EnsemblPlants:HORVU2Hr1G119980.1InterPro:Oligo_trans_STT3PFAM:PF02516PANTHER:PTHR13872PANTHER:PTHR13872:SF38TMHMM:TMhelix
UniParc:UPI000B468F2FSEG:seg::::
Description
No Description!
Coordinates
chrchr2H:-:746750318..746755573
Molecular Weight (calculated)
62960.7 Da
IEP (calculated)
9.000
GRAVY (calculated)
0.268
Length
662 amino acids
Sequence
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: ALIAVCPGYI SRSVAGSYDN EGVAIFALLL TFYLFVRAVN TGSLAWSLAA AFGYFYMVSA WGGYVFIINL LPLYVLVLLV TGRYSQRLYV AYNCTYVLGM
201: LLGMQIRFVG FQHVQSGEHM AAMGVFFLLQ VFFFLDWVKY MLNDVKLFKS FLRITLTCVI SVGTLALGIG TASGYISPWT GRFYSLLDPT YAKDHIPIIA
301: SVSEHQPTAW SSFMFDFHIL LFLFPAGLYF CFKRLSDATI FIVMYGLTSM YFAGVMVRLI LVAAPAVCLI SAIAVSATVK NLTTLIRSKS KSPQTTGKTT
401: GSKAAAKGAV DQPLPFQHNV AVALLVGAFY LLSRYAIHCT WVTSEAYSSP SIVLSARGHN GGRVIFDDYR EAYYWLRQNT PTDAKIMSWW DYGYQITAMG
501: NRTVIVDNNT WNNTHIATVG RAMSSYEDEA YEIMQSLDVN YVLVVFGGVT GYSSDDINKF LWMVRIGGGV FPVIKEPDYL VNGEYRVDKG ASPKMLNCLM
601: YKLCYYRFGE LTTEYGKPPG YDRVRGVEIG NKDVKLEYLE EAFTTSNWIV RIYKVKPPKN RS
Best Arabidopsis Sequence Match ( AT1G34130.1 )
(BLAST)
001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL
Arabidopsis Description
STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.