CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

plastid 3
golgi 3
plasma membrane 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026607_P002	Maize	plasma membrane	98.61	98.61
Os04t0675500-01	Rice	plasma membrane	96.39	96.26
TraesCS2D01G558800.1	Wheat	plasma membrane	95.0	94.61
TraesCS2B01G587900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	94.58	94.19
TraesCS2A01G555600.1	Wheat	golgi	94.31	94.04
GSMUA_Achr3P00140_001	Banana	endoplasmic reticulum, golgi	73.89	89.26
KRH38891	Soybean	endoplasmic reticulum	86.67	85.6
Solyc03g098600.2.1	Tomato	nucleus, plastid, unclear	86.11	85.52
PGSC0003DMT400026302	Potato	endoplasmic reticulum, golgi, plasma membrane	85.83	85.24
KRH09394	Soybean	endoplasmic reticulum, mitochondrion	86.39	84.86
CDY15314	Canola	plasma membrane	84.72	84.14
CDX93729	Canola	peroxisome, plasma membrane, plastid, vacuole	84.72	84.14
Bra028034.1-P	Field mustard	golgi, plasma membrane, plastid, vacuole	84.44	83.86
VIT_17s0053g00140.t01	Wine grape	plasma membrane	85.69	83.27
AT1G34130.1	Thale cress	plasma membrane	84.31	82.58
HORVU2Hr1G119980.1	Barley	cytosol	73.61	80.06
CDY28395	Canola	endoplasmic reticulum, peroxisome, plasma membrane	50.42	74.69
Bra034441.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	47.36	66.47
KXG33358	Sorghum	plasma membrane	53.75	50.26
EES19829	Sorghum	endoplasmic reticulum, golgi, plasma membrane	54.03	49.74

Protein Annotations

MapMan:18.1.1.5.7	Gene3D:3.40.50.12610	EntrezGene:8074822	UniProt:C5YAH3	EnsemblPlants:EES13093	ProteinID:EES13093
ProteinID:EES13093.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004576	GO:GO:0004579	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008250	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0018279	GO:GO:0019538
GO:GO:0043687	InterPro:Oligo_trans_STT3	PFAM:PF02516	PANTHER:PTHR13872	PANTHER:PTHR13872:SF38	EnsemblPlantsGene:SORBI_3006G265600
unigene:Sbi.5292	TMHMM:TMhelix	UniParc:UPI0001A875B7	RefSeq:XP_002448765.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:59952767..59957889

Molecular Weight (calculated)

80701.3 Da

IEP (calculated)

9.047

GRAVY (calculated)

0.359

Length

720 amino acids

Sequence
(BLAST)

001: MATSALDSLP APLRSLRLKT KQQELLLRVS ALALIYVLAF AVRLFSVLRY ESMIHEFDPY FNYRTTLFLT ENGFSEFWNW FDSESWYPLG RVVGGTLFPG
101: LMVTAALLHR LLRALSLAVH IREVCVLTAP FFAANTTLVA YAFGREIWDS GAGLVAAALI AIVPGYISRS VAGSYDNEGV AIFALLLTFY LFVRAVNTGS
201: LAWALASAFG YFYMVSAWGG YVFIINLIPL YVLVLLVTGR YSQRLYVAYN CMYVLGMLLA MQIRFVGFQH VQSGEHMAAM GVFFLLQVFF FLDWVKYLLN
301: DARLFKSFLR TTLTCVITVG TLALGIGTAS GYISPWTGRF YSLLDPTYAK DHIPIIASVS EHQPTAWSSF MFDFHILLFL FPAGLYFCFK RLSDATIFIV
401: MYGLTSMYFA GVMVRLILVA APAVCLISAI AASATIKNLT TLIRAKSRSP QTTSGKTTGS KAAAKGAVDQ SLPFQHNAAI ALLLGAFYLL SRYAIHCTWV
501: TSEAYSSPSI VLAARGHNGG RVIFDDYREA YYWLRQNTPP DAKIMSWWDY GYQITAMGNR TVIVDNNTWN NTHIATVGRA MSSYEDEAYE IMQSLDVNYV
601: LVVFGGVTGY SSDDINKFLW MVRIGGGVFP VIKEPDYLVN GEYRIDKGAA PKMLNCLMYK LCYYRFGELT TEYGKPPGYD RVRGVEIGNK DIKLEYLEEA
701: FTTSNWIVRI YKVKPPKNRS

Best Arabidopsis Sequence Match ( AT1G34130.1 )
(BLAST)

001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL

Arabidopsis Description

STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.