Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 3
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| OQU90276 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19690.1 | OQU90276 | AT5G02502.1 | 23493405 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0519900-02 | Rice | endoplasmic reticulum, golgi | 92.84 | 89.74 |
| Zm00001d038804_P002 | Maize | plasma membrane | 96.04 | 89.4 |
| TraesCS1A01G340400.1 | Wheat | golgi | 89.64 | 89.07 |
| TraesCS1D01G342400.1 | Wheat | unclear | 83.89 | 88.89 |
| TraesCS1B01G352700.1 | Wheat | golgi | 89.51 | 88.83 |
| CDY58977 | Canola | endoplasmic reticulum, golgi, vacuole | 13.94 | 87.9 |
| KXG33358 | Sorghum | plasma membrane | 84.4 | 85.71 |
| GSMUA_Achr7P24990_001 | Banana | plasma membrane | 83.5 | 83.5 |
| VIT_11s0016g03320.t01 | Wine grape | plasma membrane | 82.35 | 82.78 |
| Solyc12g008360.1.1 | Tomato | nucleus | 80.82 | 81.87 |
| KRH74276 | Soybean | nucleus | 80.56 | 80.98 |
| AT5G19690.1 | Thale cress | plasma membrane | 80.56 | 80.87 |
| CDX88879 | Canola | plasma membrane | 80.05 | 80.46 |
| CDX70886 | Canola | plasma membrane | 80.05 | 80.46 |
| Bra006514.1-P | Field mustard | plasma membrane | 80.05 | 80.46 |
| KRH07262 | Soybean | endoplasmic reticulum | 80.05 | 80.46 |
| CDX92509 | Canola | plasma membrane | 79.8 | 80.1 |
| Bra002255.1-P | Field mustard | plastid | 79.92 | 80.03 |
| CDY58976 | Canola | endoplasmic reticulum, golgi, plastid | 10.74 | 79.25 |
| VIT_11s0016g01590.t01 | Wine grape | endoplasmic reticulum | 11.89 | 78.15 |
| VIT_12s0028g03220.t01 | Wine grape | cytosol | 4.22 | 75.0 |
| CDY71196 | Canola | endoplasmic reticulum | 35.68 | 73.81 |
| CDY42286 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 67.14 | 67.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.39 | 66.67 |
| VIT_07s0005g06040.t01 | Wine grape | golgi, mitochondrion, nucleus | 3.2 | 59.52 |
| EES13093 | Sorghum | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 49.74 | 54.03 |
| KRH25466 | Soybean | cytosol | 2.3 | 52.94 |
| VIT_03s0088g00210.t01 | Wine grape | mitochondrion | 12.02 | 47.47 |
Protein Annotations
| MapMan:18.1.1.5.7 | Gene3D:3.40.50.12610 | EntrezGene:8082991 | UniProt:C5Z1B6 | EnsemblPlants:EES19829 | ProteinID:EES19829 |
| ProteinID:EES19829.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004576 | GO:GO:0004579 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005975 | GO:GO:0006464 |
| GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008250 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0018279 | GO:GO:0019538 | GO:GO:0043687 |
| InterPro:Oligo_trans_STT3 | PFAM:PF02516 | PANTHER:PTHR13872 | PANTHER:PTHR13872:SF37 | EnsemblPlantsGene:SORBI_3009G201700 | unigene:Sbi.12521 |
| TMHMM:TMhelix | UniParc:UPI0001A890E8 | RefSeq:XP_002441399.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr9:-:55106601..55112625
Molecular Weight (calculated)
86818.8 Da
IEP (calculated)
9.350
GRAVY (calculated)
0.300
Length
782 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEPEASPAA AGGGGRLRNA FGGVLCAFTL LLIGVVAFSI RLFSVIKYES VIHEFDPYFN FRVTQYLSKN GIYEFWNWFD DRTWYPLGRV IGGTVYPGLT
101: LTAGTIWWLL NSLNIPLSVE TVCVFTAPIF SANASWATYL LTKEAKGTGA GLMAAAILAM VPSYISRSVA GSYDNEAVAI FALIFTFYLY VKTLNTGSLF
201: YATLNALSYF YMVCSWGGYT FIINLIPMHV LLCIVTGRYS SRLYIAYAPL VILGTLLAAL VPVVGFNAVM TSEHFASFLV FIILHVVALV YYIKGLLTPR
301: LFKVAMTLVI SVGLAVCFAV VAILVALVAS SPTKGWSGRS LSLLDPTYAS KYIPIIASVS EHQPPTWPSY FMDINVLAFL IPAGIISCFL PLSDASSFMV
401: LYLVTAVYFS GVMVRLMLVL APAACILSGI ALSEVFSVLT RSIKFQLSKF FDDSPTSSGD SSPESSTNST KNENRNEKSE TAPKEKPSKK NRKKEKEVAE
501: SVSVKPKKEK RLLVLPFELS VMGILLLIVL GGFYVVHCVW AAAEAYSAPS IVLTSRSRDG LHVFDDFREA YAWLSHNTDV DDKVASWWDY GYQTTAMANR
601: TVIVDNNTWN NTHIATVGTA MSSPEKAAWE IFNSLDVKYV LVVFGGLVGY PSDDINKFLW MVRIGGGVFP HIKEPDYLRD GQYRVDAQAT PTMLNCLMYK
701: LCYYRFVETD GKGFDRVRGY EIGKKHFKLT HFEEVFTTHH WMVRIYKLKP QKNRVRGKLK KLKASAKTSS TLAAGQKKNP WQ
101: LTAGTIWWLL NSLNIPLSVE TVCVFTAPIF SANASWATYL LTKEAKGTGA GLMAAAILAM VPSYISRSVA GSYDNEAVAI FALIFTFYLY VKTLNTGSLF
201: YATLNALSYF YMVCSWGGYT FIINLIPMHV LLCIVTGRYS SRLYIAYAPL VILGTLLAAL VPVVGFNAVM TSEHFASFLV FIILHVVALV YYIKGLLTPR
301: LFKVAMTLVI SVGLAVCFAV VAILVALVAS SPTKGWSGRS LSLLDPTYAS KYIPIIASVS EHQPPTWPSY FMDINVLAFL IPAGIISCFL PLSDASSFMV
401: LYLVTAVYFS GVMVRLMLVL APAACILSGI ALSEVFSVLT RSIKFQLSKF FDDSPTSSGD SSPESSTNST KNENRNEKSE TAPKEKPSKK NRKKEKEVAE
501: SVSVKPKKEK RLLVLPFELS VMGILLLIVL GGFYVVHCVW AAAEAYSAPS IVLTSRSRDG LHVFDDFREA YAWLSHNTDV DDKVASWWDY GYQTTAMANR
601: TVIVDNNTWN NTHIATVGTA MSSPEKAAWE IFNSLDVKYV LVVFGGLVGY PSDDINKFLW MVRIGGGVFP HIKEPDYLRD GQYRVDAQAT PTMLNCLMYK
701: LCYYRFVETD GKGFDRVRGY EIGKKHFKLT HFEEVFTTHH WMVRIYKLKP QKNRVRGKLK KLKASAKTSS TLAAGQKKNP WQ
001: MAALESPLPG TPTAMRNAFG NVLSVLILVL IGVLAFSIRL FSVIKYESVI HEFDPYFNYR VTQFLSKNGI YEFWNWFDDR TWYPLGRVIG GTVYPGLTLT
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
Arabidopsis Description
STT3ASTT3A [Source:UniProtKB/TrEMBL;Acc:A0A178URP5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.