Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| OQU90276 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19690.1 | OQU90276 | AT5G02502.1 | 23493405 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043441_P002 | Maize | plasma membrane | 96.36 | 96.36 |
| CDY58977 | Canola | endoplasmic reticulum, golgi, vacuole | 13.77 | 85.48 |
| EES19829 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 85.71 | 84.4 |
| TraesCS3A01G274600.1 | Wheat | plasma membrane | 84.29 | 82.26 |
| CDY58976 | Canola | endoplasmic reticulum, golgi, plastid | 11.3 | 82.08 |
| TraesCS3D01G273900.1 | Wheat | plasma membrane | 84.03 | 80.77 |
| GSMUA_Achr7P24990_001 | Banana | plasma membrane | 80.52 | 79.28 |
| VIT_11s0016g03320.t01 | Wine grape | plasma membrane | 79.87 | 79.05 |
| AT5G19690.1 | Thale cress | plasma membrane | 79.74 | 78.82 |
| Solyc12g008360.1.1 | Tomato | nucleus | 78.96 | 78.76 |
| CDX70886 | Canola | plasma membrane | 79.35 | 78.53 |
| Bra006514.1-P | Field mustard | plasma membrane | 79.22 | 78.41 |
| CDX88879 | Canola | plasma membrane | 79.22 | 78.41 |
| CDX92509 | Canola | plasma membrane | 79.09 | 78.18 |
| Bra002255.1-P | Field mustard | plastid | 79.22 | 78.11 |
| KRH74276 | Soybean | nucleus | 78.83 | 78.02 |
| KRH07262 | Soybean | endoplasmic reticulum | 78.44 | 77.64 |
| TraesCS3B01G308200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 65.71 | 77.49 |
| HORVU3Hr1G071140.34 | Barley | golgi, mitochondrion, plasma membrane, plastid | 84.42 | 76.29 |
| VIT_12s0028g03220.t01 | Wine grape | cytosol | 4.16 | 72.73 |
| CDY71196 | Canola | endoplasmic reticulum | 34.68 | 70.63 |
| VIT_11s0016g01590.t01 | Wine grape | endoplasmic reticulum | 10.78 | 69.75 |
| CDY42286 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 65.84 | 65.34 |
| GSMUA_AchrUn_... | Banana | cytosol | 5.84 | 60.0 |
| EES13093 | Sorghum | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 50.26 | 53.75 |
| VIT_07s0005g06040.t01 | Wine grape | golgi, mitochondrion, nucleus | 2.86 | 52.38 |
| KRH25466 | Soybean | cytosol | 2.08 | 47.06 |
| VIT_03s0088g00210.t01 | Wine grape | mitochondrion | 11.17 | 43.43 |
Protein Annotations
| MapMan:18.1.1.5.7 | Gene3D:3.40.50.12610 | UniProt:A0A1B6Q613 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004576 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlants:KXG33358 | ProteinID:KXG33358 | ProteinID:KXG33358.1 | InterPro:Oligo_trans_STT3 | PFAM:PF02516 | PANTHER:PTHR13872 |
| PANTHER:PTHR13872:SF37 | EnsemblPlantsGene:SORBI_3003G293400 | TMHMM:TMhelix | UniParc:UPI00081AEAD1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:62586678..62594392
Molecular Weight (calculated)
85693.1 Da
IEP (calculated)
9.092
GRAVY (calculated)
0.264
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEPQSSVAS SGSVDRLRNA FGGVLCTFTL LLIGVLAFSI RLFSVIKYES VIHEFDPYFN YRVTQFLSKN GIYEFWNWFD DRTWYPLGRV IGGTVYPGLT
101: LTAGTIWWLL NSLNIPLSVE TVCVFTAPIF SVNASWATYL LTKETKDPGA GLMAATILAM VPSYISRSVA GSYDNEAVAI FALIFTFYLY VKTLNTGSLF
201: YATLNALSYF YMVCSWGGYT FIINLIPMHV LLCIVTGRYS SRLYIAYAPL IVLGTLLAAL VPVVGFNAVM TSEHFASFLV FIILHVVALG YYIKGLLTPR
301: LFKVAMTFVI TVGLAVCFAV AAILVALIAS SPTKGWSGRS LSLLDPTYAS KYIPIIASVS EHQPPTWPSY FMDINVLAFL VPAGIISCFL PLSDASSFLV
401: LYLVTSVYFS GVMVRLMLVL APAACILSGI ALSEAFGVLT RSMKFQRPTL DDGSSTAGDG SSDTPTNSEM VSKEKPSKKN RKKDRDSEGS SPVDHRTEEK
501: LLVLPCGPSA VGIMLLIILS GFYVVHCVWA AAEAYSAPSI VLTSRSHDGF HVFDDFREAY GWLRHNTDVD DKVASWWDYG YQTTAMANRT VIVDNNTWNN
601: THIATVGTAM ASPEKAAWEI FNSLDVKYVL VIFGGLIGYP SDDINKFLWM VRIGGGVFPQ IKEADYLKDG NYRVDAHGTP TMLNSLMYKL CYYRFVETDG
701: KGYDRVRRYE IGKKHFKLTH FEEVFTTHHW MVRIYKLKPQ KNRVRGKLKF KSSSKTSSMR KTGGKKSPWQ
101: LTAGTIWWLL NSLNIPLSVE TVCVFTAPIF SVNASWATYL LTKETKDPGA GLMAATILAM VPSYISRSVA GSYDNEAVAI FALIFTFYLY VKTLNTGSLF
201: YATLNALSYF YMVCSWGGYT FIINLIPMHV LLCIVTGRYS SRLYIAYAPL IVLGTLLAAL VPVVGFNAVM TSEHFASFLV FIILHVVALG YYIKGLLTPR
301: LFKVAMTFVI TVGLAVCFAV AAILVALIAS SPTKGWSGRS LSLLDPTYAS KYIPIIASVS EHQPPTWPSY FMDINVLAFL VPAGIISCFL PLSDASSFLV
401: LYLVTSVYFS GVMVRLMLVL APAACILSGI ALSEAFGVLT RSMKFQRPTL DDGSSTAGDG SSDTPTNSEM VSKEKPSKKN RKKDRDSEGS SPVDHRTEEK
501: LLVLPCGPSA VGIMLLIILS GFYVVHCVWA AAEAYSAPSI VLTSRSHDGF HVFDDFREAY GWLRHNTDVD DKVASWWDYG YQTTAMANRT VIVDNNTWNN
601: THIATVGTAM ASPEKAAWEI FNSLDVKYVL VIFGGLIGYP SDDINKFLWM VRIGGGVFPQ IKEADYLKDG NYRVDAHGTP TMLNSLMYKL CYYRFVETDG
701: KGYDRVRRYE IGKKHFKLTH FEEVFTTHHW MVRIYKLKPQ KNRVRGKLKF KSSSKTSSMR KTGGKKSPWQ
001: MAALESPLPG TPTAMRNAFG NVLSVLILVL IGVLAFSIRL FSVIKYESVI HEFDPYFNYR VTQFLSKNGI YEFWNWFDDR TWYPLGRVIG GTVYPGLTLT
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
Arabidopsis Description
STT3ASTT3A [Source:UniProtKB/TrEMBL;Acc:A0A178URP5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.