Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d022174_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19690.1 | Zm00001d022174_P001 | AT5G02502.1 | 23493405 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33358 | Sorghum | plasma membrane | 96.36 | 96.36 |
| CDY58977 | Canola | endoplasmic reticulum, golgi, vacuole | 13.64 | 84.68 |
| CDY58976 | Canola | endoplasmic reticulum, golgi, plastid | 11.3 | 82.08 |
| TraesCS3A01G274600.1 | Wheat | plasma membrane | 83.51 | 81.5 |
| TraesCS3D01G273900.1 | Wheat | plasma membrane | 83.25 | 80.03 |
| GSMUA_Achr7P24990_001 | Banana | plasma membrane | 80.26 | 79.03 |
| VIT_11s0016g03320.t01 | Wine grape | plasma membrane | 79.74 | 78.92 |
| Zm00001d038804_P002 | Maize | plasma membrane | 85.32 | 78.21 |
| AT5G19690.1 | Thale cress | plasma membrane | 78.96 | 78.05 |
| KRH74276 | Soybean | nucleus | 78.7 | 77.89 |
| Solyc12g008360.1.1 | Tomato | nucleus | 77.92 | 77.72 |
| Bra006514.1-P | Field mustard | plasma membrane | 78.31 | 77.51 |
| CDX70886 | Canola | plasma membrane | 78.31 | 77.51 |
| CDX88879 | Canola | plasma membrane | 78.31 | 77.51 |
| KRH07262 | Soybean | endoplasmic reticulum | 78.31 | 77.51 |
| CDX92509 | Canola | plasma membrane | 78.31 | 77.41 |
| Bra002255.1-P | Field mustard | plastid | 78.31 | 77.21 |
| TraesCS3B01G308200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 65.19 | 76.88 |
| HORVU3Hr1G071140.34 | Barley | golgi, mitochondrion, plasma membrane, plastid | 83.77 | 75.7 |
| VIT_12s0028g03220.t01 | Wine grape | cytosol | 4.29 | 75.0 |
| VIT_11s0016g01590.t01 | Wine grape | endoplasmic reticulum | 10.91 | 70.59 |
| CDY71196 | Canola | endoplasmic reticulum | 33.9 | 69.05 |
| CDY42286 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 65.32 | 64.82 |
| GSMUA_AchrUn_... | Banana | cytosol | 5.84 | 60.0 |
| Zm00001d026607_P002 | Maize | plasma membrane | 49.87 | 53.33 |
| Zm00001d001846_P001 | Maize | plasma membrane | 49.74 | 53.27 |
| VIT_07s0005g06040.t01 | Wine grape | golgi, mitochondrion, nucleus | 2.73 | 50.0 |
| KRH25466 | Soybean | cytosol | 2.08 | 47.06 |
| VIT_03s0088g00210.t01 | Wine grape | mitochondrion | 11.04 | 42.93 |
Protein Annotations
| EntrezGene:100279881 | MapMan:18.1.1.5.7 | Gene3D:3.40.50.12610 | UniProt:A0A1D6NBZ9 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004576 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0019538 | ProteinID:ONM38050.1 | InterPro:Oligo_trans_STT3 | PFAM:PF02516 | PANTHER:PTHR13872 | PANTHER:PTHR13872:SF37 |
| TMHMM:TMhelix | UniParc:UPI0004DE89B1 | EnsemblPlantsGene:Zm00001d043441 | EnsemblPlants:Zm00001d043441_P002 | EnsemblPlants:Zm00001d043441_T002 | SEG:seg |
Description
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
Coordinates
chr3:+:199979127..199987549
Molecular Weight (calculated)
85681.2 Da
IEP (calculated)
9.236
GRAVY (calculated)
0.291
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEPQSSVAS SGSVDRLRNA FGGVLCIFTL LLIGVLAFSI RLFSVIKYES VIHEFDPYFN YRVTQFLSKN GIYEFWNWFD DRTWYPLGRV IGGTVYPGLT
101: LTAGTIWWLL NSLNIPLSVE TVCVFTAPVF SVNASWATYL LTKETKGPGA GLMAATILAM VPSYISRSVA GSYDNEAVAI FALIFTFYLY VKTLNTGSLF
201: YAALNSLSYF YMVCSWGGYT FIINLIPMHV LLCIVTGRYS SRLYIAYAPL VVLGTLLAAS VPVVGFNAVM TSEHFASFLV FIILHVVALV YYIKGLLTPR
301: LFKVAMTFVI TVGLAVCFAA AAILIALIAS SPTKGWSGRS LSLLDPTYAS KYIPIIASVS EHQPPTWPSY FMDINVLAFL VPAGIVSCFL PLSDASSFLV
401: LYLVTSVYFS GVMVRLMLVL APAACILSGI ALSEAFGVLT RSMKFQRPTL DDGSFTAGDG SSDTPTNSEM GLKEKTSKKN RKKDKESEGS SPVDHRTEEK
501: LLVLPCGPSA VGIMLLTILS GFYVIHCVWA AAEAYSAPSI VLTSRSHDGF HVFDDFREAY GWLRHNTDAD DKVASWWDYG YQTTAMANRT VIVDNNTWNN
601: THIATVGTAM ASPEKVAWEI FNSLDVKYVL VIFGGLIGYP SDDINKFLWM VRIGGGVFPQ IKEADYLKDG NYRVDAHSTP TMLNSLMYKL CYYRFVETDG
701: KGFDRVRRYE IGKKHFKLTH FEEVFTTHHW LVRIYKLKPQ KNRVRGKLKF KSSLKASFMR KTGGKKSPWK
101: LTAGTIWWLL NSLNIPLSVE TVCVFTAPVF SVNASWATYL LTKETKGPGA GLMAATILAM VPSYISRSVA GSYDNEAVAI FALIFTFYLY VKTLNTGSLF
201: YAALNSLSYF YMVCSWGGYT FIINLIPMHV LLCIVTGRYS SRLYIAYAPL VVLGTLLAAS VPVVGFNAVM TSEHFASFLV FIILHVVALV YYIKGLLTPR
301: LFKVAMTFVI TVGLAVCFAA AAILIALIAS SPTKGWSGRS LSLLDPTYAS KYIPIIASVS EHQPPTWPSY FMDINVLAFL VPAGIVSCFL PLSDASSFLV
401: LYLVTSVYFS GVMVRLMLVL APAACILSGI ALSEAFGVLT RSMKFQRPTL DDGSFTAGDG SSDTPTNSEM GLKEKTSKKN RKKDKESEGS SPVDHRTEEK
501: LLVLPCGPSA VGIMLLTILS GFYVIHCVWA AAEAYSAPSI VLTSRSHDGF HVFDDFREAY GWLRHNTDAD DKVASWWDYG YQTTAMANRT VIVDNNTWNN
601: THIATVGTAM ASPEKVAWEI FNSLDVKYVL VIFGGLIGYP SDDINKFLWM VRIGGGVFPQ IKEADYLKDG NYRVDAHSTP TMLNSLMYKL CYYRFVETDG
701: KGFDRVRRYE IGKKHFKLTH FEEVFTTHHW LVRIYKLKPQ KNRVRGKLKF KSSLKASFMR KTGGKKSPWK
001: MAALESPLPG TPTAMRNAFG NVLSVLILVL IGVLAFSIRL FSVIKYESVI HEFDPYFNYR VTQFLSKNGI YEFWNWFDDR TWYPLGRVIG GTVYPGLTLT
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
Arabidopsis Description
STT3ASTT3A [Source:UniProtKB/TrEMBL;Acc:A0A178URP5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.