Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d022174_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19690.1 | Zm00001d022174_P001 | AT5G02502.1 | 23493405 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19829 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 89.4 | 96.04 |
| Os05t0519900-02 | Rice | endoplasmic reticulum, golgi | 86.07 | 89.37 |
| CDY58977 | Canola | endoplasmic reticulum, golgi, vacuole | 13.1 | 88.71 |
| TraesCS1D01G342400.1 | Wheat | unclear | 77.5 | 88.21 |
| TraesCS1A01G340400.1 | Wheat | golgi | 82.5 | 88.06 |
| TraesCS1B01G352700.1 | Wheat | golgi | 82.38 | 87.82 |
| Zm00001d043441_P002 | Maize | plasma membrane | 78.21 | 85.32 |
| GSMUA_Achr7P24990_001 | Banana | plasma membrane | 77.62 | 83.38 |
| VIT_11s0016g03320.t01 | Wine grape | plasma membrane | 76.79 | 82.9 |
| KRH74276 | Soybean | nucleus | 75.71 | 81.75 |
| Solyc12g008360.1.1 | Tomato | nucleus | 74.52 | 81.09 |
| AT5G19690.1 | Thale cress | plasma membrane | 74.76 | 80.62 |
| KRH07262 | Soybean | endoplasmic reticulum | 74.64 | 80.59 |
| CDX88879 | Canola | plasma membrane | 74.29 | 80.21 |
| CDX70886 | Canola | plasma membrane | 74.29 | 80.21 |
| Bra006514.1-P | Field mustard | plasma membrane | 74.29 | 80.21 |
| CDX92509 | Canola | plasma membrane | 74.29 | 80.1 |
| Bra002255.1-P | Field mustard | plastid | 74.4 | 80.03 |
| CDY58976 | Canola | endoplasmic reticulum, golgi, plastid | 10.0 | 79.25 |
| VIT_11s0016g01590.t01 | Wine grape | endoplasmic reticulum | 11.07 | 78.15 |
| VIT_12s0028g03220.t01 | Wine grape | cytosol | 3.93 | 75.0 |
| CDY71196 | Canola | endoplasmic reticulum | 32.74 | 72.75 |
| CDY42286 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 62.5 | 67.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 5.95 | 66.67 |
| VIT_07s0005g06040.t01 | Wine grape | golgi, mitochondrion, nucleus | 2.86 | 57.14 |
| Zm00001d026607_P002 | Maize | plasma membrane | 46.55 | 54.31 |
| Zm00001d001846_P001 | Maize | plasma membrane | 46.43 | 54.24 |
| KRH25466 | Soybean | cytosol | 2.14 | 52.94 |
| VIT_03s0088g00210.t01 | Wine grape | mitochondrion | 11.07 | 46.97 |
Protein Annotations
| EntrezGene:100217123 | MapMan:18.1.1.5.7 | Gene3D:3.40.50.12610 | UniProt:A0A1D6MAM8 | ProteinID:AQK87835.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004576 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:Oligo_trans_STT3 | PFAM:PF02516 | PANTHER:PTHR13872 | PANTHER:PTHR13872:SF37 |
| TMHMM:TMhelix | UniParc:UPI0008441146 | EnsemblPlantsGene:Zm00001d038804 | EnsemblPlants:Zm00001d038804_P002 | EnsemblPlants:Zm00001d038804_T002 | SEG:seg |
Description
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
Coordinates
chr6:+:164792289..164799307
Molecular Weight (calculated)
93155.5 Da
IEP (calculated)
8.869
GRAVY (calculated)
0.314
Length
840 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEPEVSPAA AGGGGRLRNA FGGVLCAFTL LLIGVVAFSI RLFSVIKYES VIHEFDPYFN FRVTQFLSKN GIYEFWNWFD DRTWYPLGRV IGGTVYPGLT
101: LTAGTMWWLL NSLNIPLSVE TVCVFTAPIF SANASWATYL LTKEAKGTGA GLMAAAILAM NALESSQVPS YISRSVAGSY DNEAVAIFAL IFTFYLYVKT
201: LNTGSLFYAT LNALSYFYMV CSWGGYTFII NLIPMHVLLC IVTGRYSSRL YIAYAPLVVL GTLLAALVPV VGFNAVMTSE HFASFLVSIY PLLDFSPFRS
301: TISLPALANV LLLEAGLPNL ETHDIPSFYN ICPTTLDTVF IILHVVALVY YIKGLLTPRL FKVAMTLVIS VGLAVCFAVV AILVALVASS PTKGWSGRSL
401: SLLDPTYASK YIPIIASVSE HQPPTWPSYF MDINVLAFLI PAGIISCFLP LSDASSFMVL YLVTAVYFSG VMVRLMLVLA PAACILSGIA LSEVFSVLTR
501: SIKLQLSKLF DDSPTSSGDS SPESSTNSTK NENRNEKHEI APKEKTSKKN RKKEKEVAES VPVKPKKENR LLVLPFELSV MGILLLIVLG GFYVVHCVWA
601: AAEAYSAPSI VLTSRSRDGL HVFDDFREAY AWLSHNTDVD DKVASWWDYG YQTTAMANRT VIVDNNTWNN THIATVGTAM SSPEKAAWEI FNSLDVKYVL
701: VVFGGLVGYP SDDINKFLWM VRIGGGVFPH IKEPDYLRDG QYRVDAQATP TMLNCLMYKL CYYRFVETDG KGFDRVRGYE IGKKHFKLTH FEEVFTTHHW
801: MVRIYKLKPQ KNRVRGKLKK LKASAKTSPT LAAGRKNPWQ
101: LTAGTMWWLL NSLNIPLSVE TVCVFTAPIF SANASWATYL LTKEAKGTGA GLMAAAILAM NALESSQVPS YISRSVAGSY DNEAVAIFAL IFTFYLYVKT
201: LNTGSLFYAT LNALSYFYMV CSWGGYTFII NLIPMHVLLC IVTGRYSSRL YIAYAPLVVL GTLLAALVPV VGFNAVMTSE HFASFLVSIY PLLDFSPFRS
301: TISLPALANV LLLEAGLPNL ETHDIPSFYN ICPTTLDTVF IILHVVALVY YIKGLLTPRL FKVAMTLVIS VGLAVCFAVV AILVALVASS PTKGWSGRSL
401: SLLDPTYASK YIPIIASVSE HQPPTWPSYF MDINVLAFLI PAGIISCFLP LSDASSFMVL YLVTAVYFSG VMVRLMLVLA PAACILSGIA LSEVFSVLTR
501: SIKLQLSKLF DDSPTSSGDS SPESSTNSTK NENRNEKHEI APKEKTSKKN RKKEKEVAES VPVKPKKENR LLVLPFELSV MGILLLIVLG GFYVVHCVWA
601: AAEAYSAPSI VLTSRSRDGL HVFDDFREAY AWLSHNTDVD DKVASWWDYG YQTTAMANRT VIVDNNTWNN THIATVGTAM SSPEKAAWEI FNSLDVKYVL
701: VVFGGLVGYP SDDINKFLWM VRIGGGVFPH IKEPDYLRDG QYRVDAQATP TMLNCLMYKL CYYRFVETDG KGFDRVRGYE IGKKHFKLTH FEEVFTTHHW
801: MVRIYKLKPQ KNRVRGKLKK LKASAKTSPT LAAGRKNPWQ
001: MAALESPLPG TPTAMRNAFG NVLSVLILVL IGVLAFSIRL FSVIKYESVI HEFDPYFNYR VTQFLSKNGI YEFWNWFDDR TWYPLGRVIG GTVYPGLTLT
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
Arabidopsis Description
STT3ASTT3A [Source:UniProtKB/TrEMBL;Acc:A0A178URP5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.