Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58977 | Canola | endoplasmic reticulum, golgi, vacuole | 15.4 | 96.77 |
| Bra002255.1-P | Field mustard | plastid | 94.22 | 93.98 |
| CDX92509 | Canola | plasma membrane | 93.97 | 93.97 |
| Bra006514.1-P | Field mustard | plasma membrane | 93.58 | 93.7 |
| CDX70886 | Canola | plasma membrane | 93.58 | 93.7 |
| CDX88879 | Canola | plasma membrane | 93.45 | 93.57 |
| CDY71196 | Canola | endoplasmic reticulum | 45.19 | 93.12 |
| CDY58976 | Canola | endoplasmic reticulum, golgi, plastid | 11.55 | 84.91 |
| Solyc12g008360.1.1 | Tomato | nucleus | 82.16 | 82.9 |
| EES19829 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 80.87 | 80.56 |
| TraesCS1D01G342400.1 | Wheat | unclear | 75.99 | 80.22 |
| KXG33358 | Sorghum | plasma membrane | 78.82 | 79.74 |
| TraesCS1B01G352700.1 | Wheat | golgi | 80.36 | 79.44 |
| TraesCS1A01G340400.1 | Wheat | golgi | 80.23 | 79.42 |
| Zm00001d043441_P002 | Maize | plasma membrane | 78.05 | 78.96 |
| CDY42286 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 77.92 | 78.22 |
| Os05t0519900-02 | Rice | endoplasmic reticulum, golgi | 80.87 | 77.87 |
| TraesCS3A01G274600.1 | Wheat | plasma membrane | 78.69 | 77.69 |
| TraesCS3D01G273900.1 | Wheat | plasma membrane | 78.43 | 76.28 |
| Zm00001d038804_P002 | Maize | plasma membrane | 80.62 | 74.76 |
| TraesCS3B01G308200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 60.46 | 72.13 |
| HORVU3Hr1G071140.34 | Barley | golgi, mitochondrion, plasma membrane, plastid | 78.43 | 71.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 5.91 | 61.33 |
| VIT_07s0005g06040.t01 | Wine grape | golgi, mitochondrion, nucleus | 2.82 | 52.38 |
| AT1G34130.1 | Thale cress | plasma membrane | 47.63 | 50.48 |
| KRH25466 | Soybean | cytosol | 2.05 | 47.06 |
| VIT_03s0088g00210.t01 | Wine grape | mitochondrion | 11.17 | 43.94 |
Protein Annotations
| MapMan:18.1.1.5.7 | Gene3D:3.40.50.12610 | EntrezGene:832089 | UniProt:A0A178URP5 | ProteinID:AED92738.1 | EMBL:AF296838 |
| ArrayExpress:AT5G19690 | EnsemblPlantsGene:AT5G19690 | RefSeq:AT5G19690 | TAIR:AT5G19690 | RefSeq:AT5G19690-TAIR-G | EnsemblPlants:AT5G19690.1 |
| TAIR:AT5G19690.1 | EMBL:AY050397 | EMBL:AY056191 | EMBL:AY059649 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004576 | GO:GO:0004579 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006464 |
| GO:GO:0006486 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008250 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0018279 | GO:GO:0019538 | GO:GO:0043687 | GO:GO:0047484 | EMBL:KJ138678 |
| RefSeq:NP_568380.1 | ProteinID:OAO96498.1 | InterPro:Oligo_trans_STT3 | PFAM:PF02516 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR13872 |
| PANTHER:PTHR13872:SF37 | UniProt:Q93ZY3 | Symbol:STT3A | TMHMM:TMhelix | UniParc:UPI00000A05C6 | UniProt:W8QN88 |
| SEG:seg | : | : | : | : | : |
Description
STT3ASTT3A [Source:UniProtKB/TrEMBL;Acc:A0A178URP5]
Coordinates
chr5:+:6652306..6658641
Molecular Weight (calculated)
86117.9 Da
IEP (calculated)
9.317
GRAVY (calculated)
0.330
Length
779 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALESPLPG TPTAMRNAFG NVLSVLILVL IGVLAFSIRL FSVIKYESVI HEFDPYFNYR VTQFLSKNGI YEFWNWFDDR TWYPLGRVIG GTVYPGLTLT
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.