Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19690.1 | KRG95809 | AT5G02502.1 | 23493405 |
| AT5G19690.1 | KRH67533 | AT5G02502.1 | 23493405 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0088g00210.t01 | Wine grape | mitochondrion | 26.47 | 4.55 |
| CDY71196 | Canola | endoplasmic reticulum | 50.0 | 4.5 |
| KRH38891 | Soybean | endoplasmic reticulum | 64.71 | 3.02 |
| KRH09394 | Soybean | endoplasmic reticulum, mitochondrion | 64.71 | 3.0 |
| TraesCS3B01G308200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 52.94 | 2.76 |
| TraesCS1D01G342400.1 | Wheat | unclear | 55.88 | 2.57 |
| TraesCS1A01G340400.1 | Wheat | golgi | 55.88 | 2.41 |
| TraesCS1B01G352700.1 | Wheat | golgi | 55.88 | 2.41 |
| Bra006514.1-P | Field mustard | plasma membrane | 52.94 | 2.31 |
| CDX70886 | Canola | plasma membrane | 52.94 | 2.31 |
| CDX88879 | Canola | plasma membrane | 52.94 | 2.31 |
| EES19829 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 52.94 | 2.3 |
| TraesCS3A01G274600.1 | Wheat | plasma membrane | 52.94 | 2.28 |
| TraesCS3D01G273900.1 | Wheat | plasma membrane | 52.94 | 2.25 |
| CDY42286 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 50.0 | 2.19 |
| KRH74276 | Soybean | nucleus | 50.0 | 2.19 |
| CDX92509 | Canola | plasma membrane | 50.0 | 2.18 |
| Bra002255.1-P | Field mustard | plastid | 50.0 | 2.18 |
| Zm00001d038804_P002 | Maize | plasma membrane | 52.94 | 2.14 |
| HORVU3Hr1G071140.34 | Barley | golgi, mitochondrion, plasma membrane, plastid | 52.94 | 2.11 |
| Os05t0519900-02 | Rice | endoplasmic reticulum, golgi | 50.0 | 2.1 |
| KXG33358 | Sorghum | plasma membrane | 47.06 | 2.08 |
| Zm00001d043441_P002 | Maize | plasma membrane | 47.06 | 2.08 |
| KRH07262 | Soybean | endoplasmic reticulum | 47.06 | 2.06 |
| AT5G19690.1 | Thale cress | plasma membrane | 47.06 | 2.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 0.0 | 0.0 |
| CDY58977 | Canola | endoplasmic reticulum, golgi, vacuole | 0.0 | 0.0 |
| CDY58976 | Canola | endoplasmic reticulum, golgi, plastid | 0.0 | 0.0 |
| VIT_07s0005g06040.t01 | Wine grape | golgi, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02007261 | EnsemblPlants:KRH25466 | EnsemblPlantsGene:GLYMA_12G105200 | ProteinID:KRH25466 | ProteinID:KRH25466.1 | UniParc:UPI0006ED8FC4 |
| UniProt:A0A0R0H495 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:9535460..9535895
Molecular Weight (calculated)
3659.7 Da
IEP (calculated)
9.403
GRAVY (calculated)
0.165
Length
34 amino acids
Sequence
(BLAST)
(BLAST)
1: MVRIGGGEYR VDKGAAPKML NCLINRIPEA ALMA
001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL
Arabidopsis Description
STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.