Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g01590.t01 | Wine grape | endoplasmic reticulum | 86.36 | 31.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.0 | 29.33 |
| TraesCS3B01G308200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 72.73 | 4.9 |
| VIT_11s0016g03320.t01 | Wine grape | plasma membrane | 86.36 | 4.88 |
| TraesCS1D01G342400.1 | Wheat | unclear | 75.0 | 4.47 |
| TraesCS3A01G274600.1 | Wheat | plasma membrane | 77.27 | 4.31 |
| Zm00001d043441_P002 | Maize | plasma membrane | 75.0 | 4.29 |
| EES19829 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 75.0 | 4.22 |
| TraesCS1A01G340400.1 | Wheat | golgi | 75.0 | 4.19 |
| TraesCS1B01G352700.1 | Wheat | golgi | 75.0 | 4.19 |
| KXG33358 | Sorghum | plasma membrane | 72.73 | 4.16 |
| TraesCS3D01G273900.1 | Wheat | plasma membrane | 75.0 | 4.12 |
| Os05t0519900-02 | Rice | endoplasmic reticulum, golgi | 75.0 | 4.08 |
| Zm00001d038804_P002 | Maize | plasma membrane | 75.0 | 3.93 |
| HORVU3Hr1G071140.34 | Barley | golgi, mitochondrion, plasma membrane, plastid | 75.0 | 3.87 |
| VIT_17s0053g00140.t01 | Wine grape | plasma membrane | 52.27 | 3.1 |
| VIT_07s0005g06040.t01 | Wine grape | golgi, mitochondrion, nucleus | 2.27 | 2.38 |
| VIT_03s0088g00210.t01 | Wine grape | mitochondrion | 9.09 | 2.02 |
Protein Annotations
| ArrayExpress:VIT_12s0028g03220 | EMBL:FN595235 | EnsemblPlants:VIT_12s0028g03220.t01 | EnsemblPlantsGene:VIT_12s0028g03220 | ProteinID:CBI21890 | ProteinID:CBI21890.3 |
| UniParc:UPI0001BE1E17 | UniProt:E0CTH5 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr12:+:3972274..3972599
Molecular Weight (calculated)
5474.8 Da
IEP (calculated)
10.538
GRAVY (calculated)
-0.573
Length
44 amino acids
Sequence
(BLAST)
(BLAST)
1: MLNCLMYKLS YFRFVETDGK GFHRLRRTEI GNKYFKLTHF KEVR
001: MVIKYESVIH EFDPYFNYRV TQFLSKNGIY EFWNWFDDRT WYPLGRVIGG TVYPGLTLTA GTIWWGLNSL NIPLSVETVC VFTAPVFSAF ASWATYLLTK
101: EVKGSGAGLA AAALLAMVPS YISRSVAGSY DNEAVAIFAL IFTFYLYIKT LNTGSLFYAT LNALAYFYMV CSWGGYTFII NLIPMHVLLC IVTGRYSPRL
201: YIAYAPLVVL GTLLAALVPV VGFNAVLTSE HFASFLVFII IHVVALVYYI KGILSPKMFK VAVTLVVSIG MVVCFIVVAI LVALVASSPT GGWSGRSLSL
301: LDPTYASKYI PIIASVSEHQ PPTWPSYFMD INVLAFLVPA GIIACFSPLS DASSFVVLYI VMSVYFSGVM VRLMLVLAPA ACIMSGIALS QAFDVFTGSI
401: KYQLGASSNS TDDAEDNTST NNAPKDDVSA GKTDKGEEIV KERSSKKGKK KEREPADKPS VKAKIKKKAL VLPLEASIVA LLLLIMLGAF YVIHCVWAAA
501: EAYSAPSIVL TSQSRDGLHV FDDFRESYAW LSHNTDVDDK VASWWDYGYQ TTAMANRTVI VDNNTWNNTH IATVGTAMSS PEKAAWEIFN SLDVKYVLVV
601: FGGLIGYPSD DINKFLWMVR IGGGVFPHIK EADYLRDGQY RIDSEATPTM LNSLMYKLSY YRFVETDGKG YDRVRRTEIG KKHFKLTHFE EVFTSHHWMV
701: RLYKLKPPRN RIRGKAKKLK SKTSSGLSSK SAKKNPWV
101: EVKGSGAGLA AAALLAMVPS YISRSVAGSY DNEAVAIFAL IFTFYLYIKT LNTGSLFYAT LNALAYFYMV CSWGGYTFII NLIPMHVLLC IVTGRYSPRL
201: YIAYAPLVVL GTLLAALVPV VGFNAVLTSE HFASFLVFII IHVVALVYYI KGILSPKMFK VAVTLVVSIG MVVCFIVVAI LVALVASSPT GGWSGRSLSL
301: LDPTYASKYI PIIASVSEHQ PPTWPSYFMD INVLAFLVPA GIIACFSPLS DASSFVVLYI VMSVYFSGVM VRLMLVLAPA ACIMSGIALS QAFDVFTGSI
401: KYQLGASSNS TDDAEDNTST NNAPKDDVSA GKTDKGEEIV KERSSKKGKK KEREPADKPS VKAKIKKKAL VLPLEASIVA LLLLIMLGAF YVIHCVWAAA
501: EAYSAPSIVL TSQSRDGLHV FDDFRESYAW LSHNTDVDDK VASWWDYGYQ TTAMANRTVI VDNNTWNNTH IATVGTAMSS PEKAAWEIFN SLDVKYVLVV
601: FGGLIGYPSD DINKFLWMVR IGGGVFPHIK EADYLRDGQY RIDSEATPTM LNSLMYKLSY YRFVETDGKG YDRVRRTEIG KKHFKLTHFE EVFTSHHWMV
701: RLYKLKPPRN RIRGKAKKLK SKTSSGLSSK SAKKNPWV
Arabidopsis Description
STT3ASTT3A [Source:UniProtKB/TrEMBL;Acc:A0A178URP5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.