Factsheet for Zm00001d026607_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13093	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	98.61	98.61
Zm00001d001846_P001	Maize	plasma membrane	97.36	97.5
Os04t0675500-01	Rice	plasma membrane	95.97	95.84
TraesCS2D01G558800.1	Wheat	plasma membrane	94.58	94.19
TraesCS2B01G587900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	93.89	93.5
TraesCS2A01G555600.1	Wheat	golgi	93.75	93.49
GSMUA_Achr3P00140_001	Banana	endoplasmic reticulum, golgi	73.61	88.93
KRH38891	Soybean	endoplasmic reticulum	86.81	85.73
KRH09394	Soybean	endoplasmic reticulum, mitochondrion	86.39	84.86
PGSC0003DMT400026302	Potato	endoplasmic reticulum, golgi, plasma membrane	85.42	84.83
Solyc03g098600.2.1	Tomato	nucleus, plastid, unclear	85.42	84.83
CDX93729	Canola	peroxisome, plasma membrane, plastid, vacuole	84.72	84.14
CDY15314	Canola	plasma membrane	84.72	84.14
Bra028034.1-P	Field mustard	golgi, plasma membrane, plastid, vacuole	84.44	83.86
VIT_17s0053g00140.t01	Wine grape	plasma membrane	85.42	83.0
AT1G34130.1	Thale cress	plasma membrane	84.31	82.58
HORVU2Hr1G119980.1	Barley	cytosol	73.19	79.61
CDY28395	Canola	endoplasmic reticulum, peroxisome, plasma membrane	50.0	74.07
Bra034441.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	46.94	65.89
Zm00001d043441_P002	Maize	plasma membrane	53.33	49.87
Zm00001d038804_P002	Maize	plasma membrane	54.31	46.55

Protein Annotations

EntrezGene:100192699	MapMan:18.1.1.5.7	Gene3D:3.40.50.12610	ProteinID:AQK47219.1	ProteinID:AQK47220.1	UniProt:B6T514
EMBL:EU960079	GO:GO:0003674	GO:GO:0003824	GO:GO:0004576	GO:GO:0005575	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0019538	InterPro:Oligo_trans_STT3	PFAM:PF02516
PANTHER:PTHR13872	PANTHER:PTHR13872:SF38	TMHMM:TMhelix	UniParc:UPI000182C72D	EnsemblPlantsGene:Zm00001d026607	EnsemblPlants:Zm00001d026607_P002
EnsemblPlants:Zm00001d026607_T002	SEG:seg	:	:	:	:

Description

Oligosaccharyl transferase STT3 subunit

Coordinates

chr10:-:148904010..148909780

Molecular Weight (calculated)

80733.4 Da

IEP (calculated)

9.124

GRAVY (calculated)

0.356

Length

720 amino acids

Sequence
(BLAST)

001: MAPSALASLP APLRSLRLKT KQQELLLRVS ALALIYVLAF AVRLFSVLRY ESMIHEFDPY FNYRTTLFLT ENGFSEFWNW FDSESWYPLG RVVGGTLFPG
101: LMVTAALLHR LLRALSLAVH IREVCVLTAP FFAANTTLVA YAFGREIWDS GAGLVAAALI ATVPGYISRS VAGSYDNEGV AIFALLLTFY FFVRAVNTGS
201: LAWALASAFG YFYMVSAWGG YVFIINLVPL YVLVLLVTGR YSQRLYVAYN CMYVLGMLLA MQIRFVGFQH VQSGEHMAAM GVFFLLQVFF FLDWVKYLLN
301: DARLFKSFLR ITLTCVITVG TLALGIGTAS GYISPWTGRF YSLLDPTYAK DHIPIIASVS EHQPTAWSSF MFDFHILLFL FPAGLYFCFK RLSDATIFIV
401: MYGLTSMYFA GVMVRLILVA APAVCLISAI AASATIKNLT TLIRTKSRSP QTTSGKTTGS KSAAKGVVDQ SLPFQHNAAI GLLLGAFYLL SRYAIHCTWV
501: TSEAYSSPSI VLAARGHNGG RVIFDDYREA YYWLRQNTPP DAKIMSWWDY GYQITAMGNR TVIVDNNTWN NTHIATVGRA MSSYEDEAYE IMQSLDVNYV
601: LVVFGGVTGY SSDDINKFLW MVRIGGGVFP VIKEPDYLVN GEYRIDKGAA PKMLNCLMYK LCYYRFGELT TEYGKPPGYD RVRGVEIGNK DIKLEYLEEA
701: FTTSNWIVRI YKVKPPKNRS

Best Arabidopsis Sequence Match ( AT1G34130.1 )
(BLAST)

001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL

Arabidopsis Description

STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.