Factsheet for PGSC0003DMT400026302

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

plastid 1
golgi 3
plasma membrane 3
extracellular 1
endoplasmic reticulum 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g098600.2.1	Tomato	nucleus, plastid, unclear	97.24	97.24
GSMUA_Achr3P00140_001	Banana	endoplasmic reticulum, golgi	74.34	90.44
VIT_17s0053g00140.t01	Wine grape	plasma membrane	91.03	89.07
Bra028034.1-P	Field mustard	golgi, plasma membrane, plastid, vacuole	88.28	88.28
CDX93729	Canola	peroxisome, plasma membrane, plastid, vacuole	88.28	88.28
CDY15314	Canola	plasma membrane	88.14	88.14
KRH38891	Soybean	endoplasmic reticulum	88.0	87.52
AT1G34130.1	Thale cress	plasma membrane	88.69	87.48
KRH09394	Soybean	endoplasmic reticulum, mitochondrion	87.86	86.9
EES13093	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	85.24	85.83
Os04t0675500-01	Rice	plasma membrane	85.1	85.58
Zm00001d026607_P002	Maize	plasma membrane	84.83	85.42
Zm00001d001846_P001	Maize	plasma membrane	84.69	85.4
TraesCS2D01G558800.1	Wheat	plasma membrane	84.28	84.51
TraesCS2A01G555600.1	Wheat	golgi	84.0	84.35
TraesCS2B01G587900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	84.0	84.23
CDY28395	Canola	endoplasmic reticulum, peroxisome, plasma membrane	52.0	77.57
HORVU2Hr1G119980.1	Barley	cytosol	68.41	74.92
Bra034441.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	48.97	69.2

Protein Annotations

EntrezGene:102599835	MapMan:18.1.1.5.7	Gene3D:3.40.50.12610	GO:GO:0003674	GO:GO:0003824	GO:GO:0004576
GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0019538
UniProt:M1AN00	InterPro:Oligo_trans_STT3	PFAM:PF02516	EnsemblPlantsGene:PGSC0003DMG400010152	PGSC:PGSC0003DMG400010152	EnsemblPlants:PGSC0003DMT400026302
PANTHER:PTHR13872	PANTHER:PTHR13872:SF38	TMHMM:TMhelix	UniParc:UPI000295182A	RefSeq:XP_006353938.1	SEG:seg

Description

Integral membrane protein [Source:PGSC_GENE;Acc:PGSC0003DMG400010152]

Coordinates

chr3:+:44515977..44521855

Molecular Weight (calculated)

81950.1 Da

IEP (calculated)

9.217

GRAVY (calculated)

0.331

Length

725 amino acids

Sequence
(BLAST)

001: MEKATDLLSS SQSLFSLKSL KLKTKQKELL LRISILGLVY ILAFITRLFS VLRYESMIHE FDPYFNYRTT LYLTQKGFYE FWNWFDSESW YPLGRIIGGT
101: LYPGLMVTAA FIYWILRFLR FAVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AALIAICPGY ISRSVAGSYD NEGVAIFALL LTFYLFVKAV
201: KTGSLAWSLA SALGYFYMVS AWGGYVFIIN LIPLYVLVLL VVGRYSMRLY VAYNCMYILG MLLAMQIRFV GFQHVQSGEH MAAMGVFFLM QVFYFLDWVK
301: HLLNDQKLFQ AFLRITLTCA ISVGVIALGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDFHI LLILFPAGLY FCFKRLSDAT
401: IFIVMYGLTS MYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLSLLVRTK TKPTQAGSGK GTTSTKASSK GALDQSLPYQ KNGAIALLVG AFYLLTRYAI
501: HCTWVTSEAY SSPSIVLAAR GAHGNRVIFD DYREAYFWLR QNTPQDAKVM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE DEAYEIMRSL
601: DVDYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEYRV DKGAAPKMLN CLMYKLSYYR FGELTTEYGQ PPGYDRARGV EIGNKDIKLE
701: YLEEAFTTSN WIVRIYKVKP PKNRW

Best Arabidopsis Sequence Match ( AT1G34130.1 )
(BLAST)

001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL

Arabidopsis Description

STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.