Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- plasma membrane 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029567_P001 | Maize | golgi, plastid, vacuole | 98.29 | 98.29 |
| Os11t0132400-01 | Rice | vacuole | 42.73 | 92.59 |
| TraesCS7B01G294700.1 | Wheat | cytosol, plasma membrane, vacuole | 79.49 | 83.04 |
| TraesCS5D01G147900.1 | Wheat | cytosol, plasma membrane, vacuole | 78.63 | 82.14 |
| TraesCS5A01G144100.1 | Wheat | cytosol, plasma membrane, vacuole | 78.63 | 82.14 |
| TraesCS7A01G392700.1 | Wheat | cytosol, plasma membrane, vacuole | 77.78 | 81.25 |
| TraesCS5B01G143200.1 | Wheat | cytosol, plasma membrane, vacuole | 77.78 | 81.25 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 30.77 | 78.26 |
| OQU90188 | Sorghum | cytosol, extracellular, plasma membrane | 76.07 | 75.42 |
| KRH11067 | Soybean | cytosol | 68.38 | 68.97 |
| KRH21204 | Soybean | cytosol | 67.52 | 68.1 |
| Solyc07g065740.2.1 | Tomato | golgi, plasma membrane, plastid | 67.52 | 66.95 |
| CDY04059 | Canola | golgi, plasma membrane, plastid | 68.38 | 66.67 |
| CDX85252 | Canola | golgi, plasma membrane, plastid | 67.52 | 66.39 |
| CDY44404 | Canola | golgi, nucleus, plasma membrane | 67.52 | 65.83 |
| PGSC0003DMT400057016 | Potato | golgi, plasma membrane, plastid | 65.81 | 65.25 |
| Bra033089.1-P | Field mustard | golgi, nucleus, plasma membrane | 66.67 | 65.0 |
| CDX86385 | Canola | golgi, plasma membrane, plastid | 65.81 | 64.17 |
| Bra025380.1-P | Field mustard | golgi, plasma membrane, plastid | 65.81 | 64.17 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plasma membrane | 63.25 | 63.79 |
| AT3G29170.1 | Thale cress | golgi, plasma membrane, plastid | 64.1 | 61.98 |
| HORVU5Hr1G045930.1 | Barley | cytosol, mitochondrion, nucleus | 79.49 | 51.38 |
| Os12t0129000-01 | Rice | plasma membrane | 86.32 | 48.1 |
Protein Annotations
| EnsemblPlants:EER92102 | EnsemblPlantsGene:SORBI_3001G332300 | EntrezGene:8064443 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF872_TM | PANTHER:PTHR15664 | PANTHER:PTHR15664:SF0 | PFAM:PF05915 | ProteinID:EER92102 | ProteinID:EER92102.1 |
| RefSeq:XP_002465104.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0001A82002 | UniProt:C5WVP5 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr1:+:62084823..62087480
Molecular Weight (calculated)
13386.9 Da
IEP (calculated)
8.702
GRAVY (calculated)
-0.039
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARRNVRYS PLPSEDGGDS NFTKEDVDLR YTYTPKSYRR IPWKSIALAL FLLLLGTSLL FLSYFIFTGH MEGDSSQAYG LLFLGFLSFL PGFYETRVAY
101: YSWRGAPGYT FASIPDY
101: YSWRGAPGYT FASIPDY
001: MASRRSVRYA QLPGDEDDEG YGNGVGERRD FDPRFDYSPK AFDRVPWKSI ALAVFLLFLG CLLLLLSFFI FIGHMEGDSS QGYALLVLGI LTFLPGFYET
101: RIAYYSWRGA EGYRFAAIPS Y
101: RIAYYSWRGA EGYRFAAIPS Y
Arabidopsis Description
At3g29170 [Source:UniProtKB/TrEMBL;Acc:Q9LVP2]
SUBAcon: [plasma membrane,golgi,plastid]
SUBAcon: [plasma membrane,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.