Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 3
- plastid 2
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 68.52 | 80.43 |
TraesCS7B01G294700.1 | Wheat | cytosol, plasma membrane, vacuole | 92.59 | 44.64 |
TraesCS7A01G392700.1 | Wheat | cytosol, plasma membrane, vacuole | 92.59 | 44.64 |
TraesCS5D01G147900.1 | Wheat | cytosol, plasma membrane, vacuole | 88.89 | 42.86 |
TraesCS5B01G143200.1 | Wheat | cytosol, plasma membrane, vacuole | 88.89 | 42.86 |
TraesCS5A01G144100.1 | Wheat | cytosol, plasma membrane, vacuole | 88.89 | 42.86 |
Zm00001d029567_P001 | Maize | golgi, plastid, vacuole | 92.59 | 42.73 |
EER92102 | Sorghum | cytosol, golgi, vacuole | 92.59 | 42.73 |
GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plasma membrane | 81.48 | 37.93 |
Solyc07g065740.2.1 | Tomato | golgi, plasma membrane, plastid | 77.78 | 35.59 |
KRH11067 | Soybean | cytosol | 75.93 | 35.34 |
KRH21204 | Soybean | cytosol | 75.93 | 35.34 |
CDY44404 | Canola | golgi, nucleus, plasma membrane | 77.78 | 35.0 |
CDY04059 | Canola | golgi, plasma membrane, plastid | 77.78 | 35.0 |
Bra033089.1-P | Field mustard | golgi, nucleus, plasma membrane | 77.78 | 35.0 |
PGSC0003DMT400057016 | Potato | golgi, plasma membrane, plastid | 75.93 | 34.75 |
CDX85252 | Canola | golgi, plasma membrane, plastid | 75.93 | 34.45 |
CDX86385 | Canola | golgi, plasma membrane, plastid | 75.93 | 34.17 |
Bra025380.1-P | Field mustard | golgi, plasma membrane, plastid | 75.93 | 34.17 |
AT3G29170.1 | Thale cress | golgi, plasma membrane, plastid | 75.93 | 33.88 |
HORVU5Hr1G045930.1 | Barley | cytosol, mitochondrion, nucleus | 88.89 | 26.52 |
Os12t0129000-01 | Rice | plasma membrane | 100.0 | 25.71 |
Protein Annotations
EnsemblPlants:Os11t0132400-01 | EnsemblPlantsGene:Os11g0132400 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF872_TM |
PANTHER:PTHR15664 | PANTHER:PTHR15664:SF0 | PFAM:PF05915 | ProteinID:BAF27508.1 | ProteinID:BAT12533.1 | TMHMM:TMhelix |
UniParc:UPI0000DD9AFC | UniProt:Q0IUV7 | MapMan:35.2 | : | : | : |
Description
Uncharacterised protein family UPF0414 domain containing protein. (Os11t0132400-01)
Coordinates
chr11:-:1472913..1473988
Molecular Weight (calculated)
6057.1 Da
IEP (calculated)
4.539
GRAVY (calculated)
0.170
Length
54 amino acids
Sequence
(BLAST)
(BLAST)
1: YFIFTGHMEG DNSQAYGLLF LGILAFLPGF YETRVAYYSS RGAPGYTFAS IPDY
001: MASRRSVRYA QLPGDEDDEG YGNGVGERRD FDPRFDYSPK AFDRVPWKSI ALAVFLLFLG CLLLLLSFFI FIGHMEGDSS QGYALLVLGI LTFLPGFYET
101: RIAYYSWRGA EGYRFAAIPS Y
101: RIAYYSWRGA EGYRFAAIPS Y
Arabidopsis Description
At3g29170 [Source:UniProtKB/TrEMBL;Acc:Q9LVP2]
SUBAcon: [plasma membrane,golgi,plastid]
SUBAcon: [plasma membrane,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.