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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 3
  • plastid 2
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana endoplasmic reticulum, vacuole 68.52 80.43
TraesCS7B01G294700.1 Wheat cytosol, plasma membrane, vacuole 92.59 44.64
TraesCS7A01G392700.1 Wheat cytosol, plasma membrane, vacuole 92.59 44.64
TraesCS5D01G147900.1 Wheat cytosol, plasma membrane, vacuole 88.89 42.86
TraesCS5B01G143200.1 Wheat cytosol, plasma membrane, vacuole 88.89 42.86
TraesCS5A01G144100.1 Wheat cytosol, plasma membrane, vacuole 88.89 42.86
Zm00001d029567_P001 Maize golgi, plastid, vacuole 92.59 42.73
EER92102 Sorghum cytosol, golgi, vacuole 92.59 42.73
GSMUA_Achr11P... Banana cytosol, mitochondrion, plasma membrane 81.48 37.93
Solyc07g065740.2.1 Tomato golgi, plasma membrane, plastid 77.78 35.59
KRH11067 Soybean cytosol 75.93 35.34
KRH21204 Soybean cytosol 75.93 35.34
CDY44404 Canola golgi, nucleus, plasma membrane 77.78 35.0
CDY04059 Canola golgi, plasma membrane, plastid 77.78 35.0
Bra033089.1-P Field mustard golgi, nucleus, plasma membrane 77.78 35.0
PGSC0003DMT400057016 Potato golgi, plasma membrane, plastid 75.93 34.75
CDX85252 Canola golgi, plasma membrane, plastid 75.93 34.45
CDX86385 Canola golgi, plasma membrane, plastid 75.93 34.17
Bra025380.1-P Field mustard golgi, plasma membrane, plastid 75.93 34.17
AT3G29170.1 Thale cress golgi, plasma membrane, plastid 75.93 33.88
HORVU5Hr1G045930.1 Barley cytosol, mitochondrion, nucleus 88.89 26.52
Os12t0129000-01 Rice plasma membrane 100.0 25.71
Protein Annotations
EnsemblPlants:Os11t0132400-01EnsemblPlantsGene:Os11g0132400GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:DUF872_TM
PANTHER:PTHR15664PANTHER:PTHR15664:SF0PFAM:PF05915ProteinID:BAF27508.1ProteinID:BAT12533.1TMHMM:TMhelix
UniParc:UPI0000DD9AFCUniProt:Q0IUV7MapMan:35.2:::
Description
Uncharacterised protein family UPF0414 domain containing protein. (Os11t0132400-01)
Coordinates
chr11:-:1472913..1473988
Molecular Weight (calculated)
6057.1 Da
IEP (calculated)
4.539
GRAVY (calculated)
0.170
Length
54 amino acids
Sequence
(BLAST)
1: YFIFTGHMEG DNSQAYGLLF LGILAFLPGF YETRVAYYSS RGAPGYTFAS IPDY
Best Arabidopsis Sequence Match ( AT3G29170.1 )
(BLAST)
001: MASRRSVRYA QLPGDEDDEG YGNGVGERRD FDPRFDYSPK AFDRVPWKSI ALAVFLLFLG CLLLLLSFFI FIGHMEGDSS QGYALLVLGI LTFLPGFYET
101: RIAYYSWRGA EGYRFAAIPS Y
Arabidopsis Description
At3g29170 [Source:UniProtKB/TrEMBL;Acc:Q9LVP2]
SUBAcon: [plasma membrane,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.