Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004482_P001 | Maize | cytosol, extracellular, mitochondrion, vacuole | 92.25 | 93.7 |
| TraesCS2A01G009000.1 | Wheat | cytosol | 81.4 | 82.03 |
| TraesCS2D01G009800.1 | Wheat | cytosol | 79.84 | 80.47 |
| TraesCS2B01G101500.1 | Wheat | cytosol | 79.84 | 80.47 |
| TraesCS1B01G094400.1 | Wheat | cytosol | 78.29 | 78.91 |
| TraesCS1D01G078300.1 | Wheat | cytosol | 77.52 | 78.12 |
| Os05t0188300-01 | Rice | cytosol, extracellular, vacuole | 78.29 | 77.1 |
| TraesCS1A01G075900.1 | Wheat | mitochondrion | 78.29 | 73.19 |
| GSMUA_Achr2P09220_001 | Banana | cytosol | 52.71 | 53.54 |
| AT5G19570.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.71 | 49.63 |
| CDY42278 | Canola | extracellular, plasma membrane, vacuole | 51.94 | 48.55 |
| VIT_11s0016g03470.t01 | Wine grape | extracellular | 51.16 | 48.53 |
| Bra020049.1-P | Field mustard | golgi, plasma membrane, vacuole | 51.94 | 46.85 |
| CDY44927 | Canola | golgi, plasma membrane, vacuole | 51.94 | 46.85 |
| Solyc11g006870.1.1 | Tomato | plasma membrane | 44.96 | 43.94 |
| PGSC0003DMT400061606 | Potato | extracellular, nucleus, plasma membrane | 44.96 | 43.94 |
| KRH41529 | Soybean | endoplasmic reticulum, golgi, mitochondrion | 47.29 | 43.88 |
| KRH60241 | Soybean | cytosol, extracellular, plasma membrane | 50.39 | 32.66 |
Protein Annotations
| EnsemblPlants:EES11767 | EnsemblPlantsGene:SORBI_3006G010700 | EntrezGene:8080273 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMEM234 | PANTHER:PTHR28668 | PFAM:PF10639 | ProteinID:EES11767 | ProteinID:EES11767.1 | RefSeq:XP_002447439.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0001A8718B | UniProt:C5YBR8 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr6:-:1563807..1567126
Molecular Weight (calculated)
13219.2 Da
IEP (calculated)
11.907
GRAVY (calculated)
0.781
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGRSDAAS MVAVGLVWGA TNALMRRGAL VWDRRARASY PSGGNVFRRW AALLLTWQYS APFAANLCAS AAFFALLGAA PISVAVPVTN AVTFAATAAA
101: AAALGERVRP APAVLGTALI VLGVWVCIS
101: AAALGERVRP APAVLGTALI VLGVWVCIS
001: MKEDMDKMVA VGLVWGATNA LIRRGALAWD KTKSSSTTES HSPPLQIRRK IMIALRDWIN LLLFWQYSIP FLINLSASAT FFALLSHAPI SLAVPVTNAT
101: TFAATAAFGI LLGEETQIGL ALLGTSFIVF GIWLCVL
101: TFAATAAFGI LLGEETQIGL ALLGTSFIVF GIWLCVL
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q94AU5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.