Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G078300.1 | Wheat | cytosol | 90.58 | 97.66 |
| TraesCS1B01G094400.1 | Wheat | cytosol | 89.86 | 96.88 |
| TraesCS2A01G009000.1 | Wheat | cytosol | 89.86 | 96.88 |
| Os05t0188300-01 | Rice | cytosol, extracellular, vacuole | 78.99 | 83.21 |
| Zm00001d004482_P001 | Maize | cytosol, extracellular, mitochondrion, vacuole | 73.91 | 80.31 |
| EES11767 | Sorghum | plastid | 73.19 | 78.29 |
| GSMUA_Achr2P09220_001 | Banana | cytosol | 55.07 | 59.84 |
| VIT_11s0016g03470.t01 | Wine grape | extracellular | 52.17 | 52.94 |
| CDY42278 | Canola | extracellular, plasma membrane, vacuole | 52.9 | 52.9 |
| AT5G19570.1 | Thale cress | cytosol, peroxisome, plasma membrane | 50.0 | 50.37 |
| Bra020049.1-P | Field mustard | golgi, plasma membrane, vacuole | 52.17 | 50.35 |
| CDY44927 | Canola | golgi, plasma membrane, vacuole | 52.17 | 50.35 |
| PGSC0003DMT400061606 | Potato | extracellular, nucleus, plasma membrane | 47.1 | 49.24 |
| Solyc11g006870.1.1 | Tomato | plasma membrane | 46.38 | 48.48 |
| KRH41529 | Soybean | endoplasmic reticulum, golgi, mitochondrion | 46.38 | 46.04 |
| KRH60241 | Soybean | cytosol, extracellular, plasma membrane | 50.0 | 34.67 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G075900.1 | EnsemblPlantsGene:TraesCS1A01G075900 | InterPro:TMEM234 | PANTHER:PTHR28668 | PFAM:PF10639 | SEG:seg |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:58860237..58860653
Molecular Weight (calculated)
14358.6 Da
IEP (calculated)
12.206
GRAVY (calculated)
0.621
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQIHRKRAS MAAVGGDAAS MVAVGLVWGA TNALMRRGAL VWDRRSRSLP AGTGAVRRWA DLLLTWQYSA PFLANLSASA AFFRLLGDSP ISVAVPVTNA
101: TTFAATAVAA ALLREATRAA PAALGTALIV LGVWVCIV
101: TTFAATAVAA ALLREATRAA PAALGTALIV LGVWVCIV
001: MKEDMDKMVA VGLVWGATNA LIRRGALAWD KTKSSSTTES HSPPLQIRRK IMIALRDWIN LLLFWQYSIP FLINLSASAT FFALLSHAPI SLAVPVTNAT
101: TFAATAAFGI LLGEETQIGL ALLGTSFIVF GIWLCVL
101: TFAATAAFGI LLGEETQIGL ALLGTSFIVF GIWLCVL
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q94AU5]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.