Factsheet for GSMUA_Achr3P09080_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P07950_001	Banana	cytosol	50.0	50.0
GSMUA_AchrUn_...	Banana	cytosol	40.72	47.55
TraesCS5A01G181100.1	Wheat	mitochondrion	36.53	41.78
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	35.63	40.61
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	35.63	40.61
GSMUA_AchrUn_...	Banana	mitochondrion	41.02	39.26
Zm00001d003869_P001	Maize	cytosol	35.93	37.27
TraesCS5D01G185500.1	Wheat	plastid	35.63	37.07
Os03t0358900-00	Rice	cytosol	36.23	36.89
Os03t0356900-01	Rice	extracellular	35.63	36.62
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	35.03	36.45
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	35.03	35.89
EES12063	Sorghum	cytosol	35.33	34.71
GSMUA_Achr3P29480_001	Banana	cytosol	24.25	31.03
GSMUA_Achr4P06810_001	Banana	cytosol	28.14	30.72
GSMUA_Achr1P23110_001	Banana	cytosol	27.54	29.77
TraesCS1A01G057000.1	Wheat	cytosol	34.73	29.74
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	34.43	29.34
GSMUA_Achr2P06730_001	Banana	cytosol	8.98	28.85
GSMUA_Achr1P12830_001	Banana	cytosol	8.98	24.79
GSMUA_Achr11P...	Banana	cytosol	26.95	21.43
GSMUA_Achr9P21400_001	Banana	cytosol	15.57	18.77
GSMUA_Achr1P06960_001	Banana	cytosol	8.08	10.84

Protein Annotations

EnsemblPlants:GSMUA_Achr3P09080_001	EnsemblPlants:GSMUA_Achr3T09080_001	EnsemblPlantsGene:GSMUA_Achr3G09080_001	Gene3D:3.40.50.300	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	InterPro:P-loop_NTPase	KEGG:00908+2.5.1.75
PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	PFAM:PF01715	SEG:seg	SUPFAM:SSF52540	UniParc:UPI0002955C51
UniProt:M0SD25	MapMan:50.2.5	:	:	:	:

Description

Putative Adenylate isopentenyltransferase 5, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G09080_001]

Coordinates

chr3:+:6555977..6557098

Molecular Weight (calculated)

37199.6 Da

IEP (calculated)

7.677

GRAVY (calculated)

-0.109

Length

334 amino acids

Sequence
(BLAST)

001: MEAAAALQHL FIMAHHSFSS VLLSLHACLD REQRWNSMLR SCKADRCSSF FRMPSYPLFL IQFWFPRVPS VPCRLLPPLV DVPAVARMVY KDKVVFILGT
101: TGSGKSKLAI ALAKSFRGEA DFTASHFRRE ATRAVESILG RGGLPIVAGG SNSYIEELVE GVGGEFRSRY DCCFLWVDVE LPVLHEFVSS RVDKMVEQGL
201: VKEARAAFRP DGDYSRGIWR SIGVSEMDGY FRSGDSAGDG ETKARMLEAA VDAIKANTCR LACCQLQKIR RFCAMGWDVH RIDATEFFQR RGRGSEEELW
301: EEVVGEPGAA ITRSFLASKN QNNELDATAN AATF

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.