CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
mitochondrion 3
cytosol 3
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003869_P001	Maize	cytosol	82.94	87.58
Os03t0356900-01	Rice	extracellular	60.29	63.08
Os03t0358900-00	Rice	cytosol	60.59	62.8
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	58.82	61.35
TraesCS5D01G185500.1	Wheat	plastid	52.94	56.07
Solyc11g063730.1.1	Tomato	cytosol	7.94	55.1
Solyc11g027990.1.1	Tomato	cytosol	9.41	54.24
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	60.59	52.55
TraesCS1A01G057000.1	Wheat	cytosol	60.0	52.31
Solyc11g019850.1.1	Tomato	cytosol	8.24	51.85
Solyc08g061790.1.1	Tomato	cytosol	9.12	50.0
Solyc11g061800.1.1	Tomato	cytosol	7.35	50.0
Solyc11g019900.1.1	Tomato	cytosol	8.24	47.46
Solyc11g063470.1.1	Tomato	cytosol	7.35	46.3
Solyc11g061780.1.1	Tomato	cytosol	7.35	45.45
OQU90772	Sorghum	plastid	44.71	44.71
Solyc11g061860.1.1	Tomato	cytosol	18.24	44.6
PGSC0003DMT400087375	Potato	cytosol	10.59	43.37
Solyc11g019880.1.1	Tomato	cytosol	15.29	42.98
PGSC0003DMT400088039	Potato	cytosol	17.65	42.55
PGSC0003DMT400097535	Potato	mitochondrion	21.76	42.53
PGSC0003DMT400091323	Potato	cytosol	18.24	42.18
PGSC0003DMT400086561	Potato	cytosol	12.65	42.16
PGSC0003DMT400097056	Potato	mitochondrion	14.41	41.88
PGSC0003DMT400088950	Potato	cytosol	26.18	41.78
Solyc11g020400.1.1	Tomato	cytosol	13.82	41.59
EER96067	Sorghum	plastid	43.82	41.16
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	38.82	41.12
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	31.18	41.09
PGSC0003DMT400091824	Potato	cytosol, mitochondrion, nucleus	21.47	40.78
KRH71448	Soybean	golgi, mitochondrion, plastid	39.12	40.67
PGSC0003DMT400085022	Potato	cytosol	32.65	40.51
PGSC0003DMT400085545	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	20.0	40.48
GSMUA_Achr5P07950_001	Banana	cytosol	39.71	40.42
PGSC0003DMT400097181	Potato	cytosol	25.29	40.38
PGSC0003DMT400090456	Potato	cytosol, mitochondrion, plastid	13.24	39.82
VIT_05s0020g02630.t01	Wine grape	cytosol	38.53	39.7
PGSC0003DMT400094689	Potato	cytosol, mitochondrion, peroxisome	25.88	39.64
PGSC0003DMT400097110	Potato	cytosol	19.12	39.63
PGSC0003DMT400092830	Potato	cytosol	18.53	39.62
PGSC0003DMT400092576	Potato	cytosol	18.24	39.49
Solyc11g061870.1.1	Tomato	cytosol	23.53	39.22
PGSC0003DMT400088770	Potato	cytosol	17.94	39.1
PGSC0003DMT400087535	Potato	cytosol	31.18	38.97
AT5G19040.1	Thale cress	mitochondrion	37.65	38.79
Solyc11g063710.1.1	Tomato	cytosol	23.24	38.73
Solyc11g063740.1.1	Tomato	cytosol	23.24	38.73
EES02950	Sorghum	cytosol	41.76	38.59
Solyc09g064910.1.1	Tomato	mitochondrion	35.59	38.53
KRH67172	Soybean	plastid	35.0	38.51
CDY13945	Canola	mitochondrion	37.65	38.32
AT3G23630.1	Thale cress	mitochondrion, plastid	37.06	38.3
PGSC0003DMT400090908	Potato	cytosol	25.59	38.16
Solyc11g061900.1.1	Tomato	cytosol	22.06	38.07
PGSC0003DMT400084902	Potato	cytosol	19.71	38.07
VIT_09s0070g00710.t01	Wine grape	mitochondrion	34.71	38.06
Solyc11g019890.1.1	Tomato	cytosol	22.94	38.05
PGSC0003DMT400096405	Potato	cytosol	18.53	37.95
Solyc11g020380.1.1	Tomato	cytosol	22.06	37.88
Bra023701.1-P	Field mustard	cytosol	36.76	37.76
PGSC0003DMT400091399	Potato	cytosol	15.88	37.76
Bra002204.1-P	Field mustard	mitochondrion	37.06	37.72
PGSC0003DMT400086264	Potato	cytosol	31.18	37.72
CDY47191	Canola	cytosol	36.47	37.46
CDX92563	Canola	mitochondrion	36.76	37.43
CDY02590	Canola	cytosol	36.76	37.43
KRG95498	Soybean	mitochondrion	34.12	37.42
PGSC0003DMT400002509	Potato	mitochondrion	35.0	37.3
Solyc11g061830.1.1	Tomato	cytosol	22.35	37.25
KRH31999	Soybean	mitochondrion	37.65	37.21
Solyc11g063690.1.1	Tomato	cytosol	17.35	37.11
Bra007728.1-P	Field mustard	plastid	36.18	37.05
CDX85119	Canola	plastid	36.18	37.05
CDY63340	Canola	plastid	36.18	37.05
CDY67797	Canola	mitochondrion	36.18	37.05
CDX77492	Canola	plastid	35.88	36.75
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	22.06	36.59
PGSC0003DMT400088899	Potato	cytosol	23.82	36.49
Bra014968.1-P	Field mustard	plastid	35.59	36.45
PGSC0003DMT400088851	Potato	cytosol	25.59	36.4
PGSC0003DMT400087595	Potato	cytosol	14.71	36.23
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	35.0	36.17
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	19.12	36.11
PGSC0003DMT400094329	Potato	cytosol, mitochondrion, nucleus	14.12	36.09
PGSC0003DMT400083203	Potato	cytosol	35.0	36.06
CDX93935	Canola	plastid	35.29	35.93
PGSC0003DMT400086959	Potato	cytosol	8.53	35.8
PGSC0003DMT400088320	Potato	cytosol	14.41	35.77
Solyc11g061890.1.1	Tomato	cytosol	12.94	35.48
AT3G63110.1	Thale cress	plastid	35.0	35.42
Bra040431.1-P	Field mustard	mitochondrion, plastid	34.71	35.33
CDX89173	Canola	mitochondrion, plastid	34.71	35.33
GSMUA_Achr3P09080_001	Banana	extracellular	34.71	35.33
PGSC0003DMT400089640	Potato	mitochondrion	26.76	35.27
KRH01762	Soybean	extracellular, golgi, vacuole	34.41	35.14
PGSC0003DMT400090073	Potato	cytosol	25.0	34.98
PGSC0003DMT400091271	Potato	cytosol	12.94	34.92
Bra028326.1-P	Field mustard	plastid	30.88	34.88
KRH46921	Soybean	cytosol	30.0	34.81
KRH02126	Soybean	plastid	34.71	34.71
KRH51017	Soybean	plastid	34.12	34.52
Solyc08g061690.1.1	Tomato	cytosol	19.71	33.84
PGSC0003DMT400090406	Potato	cytosol	32.06	33.64
PGSC0003DMT400088552	Potato	cytosol	18.24	33.51
KRH11376	Soybean	extracellular	33.24	33.04
PGSC0003DMT400093701	Potato	cytosol	24.12	32.93
PGSC0003DMT400097346	Potato	cytosol	12.94	32.84
CDY18104	Canola	cytosol	27.06	32.51
PGSC0003DMT400093770	Potato	cytosol, mitochondrion, plastid	18.53	31.98
PGSC0003DMT400090690	Potato	cytosol	12.94	31.65
PGSC0003DMT400095880	Potato	cytosol	12.35	31.58
PGSC0003DMT400086310	Potato	cytosol	11.18	31.15
PGSC0003DMT400093491	Potato	cytosol	22.06	30.61
PGSC0003DMT400087380	Potato	cytosol	15.0	30.36
KRH20915	Soybean	cytosol	13.53	29.87
KXG33157	Sorghum	mitochondrion, plastid	32.06	29.14
PGSC0003DMT400089330	Potato	cytosol	24.12	28.87
KXG22495	Sorghum	mitochondrion	32.35	28.28
PGSC0003DMT400068919	Potato	cytosol, mitochondrion, nucleus	14.12	27.75
PGSC0003DMT400091817	Potato	cytosol	12.35	27.63
PGSC0003DMT400090318	Potato	cytosol	8.24	26.92
PGSC0003DMT400085014	Potato	cytosol	17.35	26.34
PGSC0003DMT400094882	Potato	cytosol	17.06	25.78
PGSC0003DMT400087085	Potato	cytosol	22.35	25.5
PGSC0003DMT400086337	Potato	cytosol	21.76	25.0
PGSC0003DMT400092288	Potato	cytosol	15.59	25.0
PGSC0003DMT400096448	Potato	cytosol	7.65	25.0
PGSC0003DMT400085869	Potato	cytosol	25.88	24.93
PGSC0003DMT400096037	Potato	cytosol	7.35	24.75
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	22.06	24.67
PGSC0003DMT400086709	Potato	cytosol	17.94	23.92
EES02135	Sorghum	cytosol, plastid	32.94	23.88
PGSC0003DMT400090493	Potato	cytosol	25.59	23.58
PGSC0003DMT400095385	Potato	cytosol	28.53	23.54
PGSC0003DMT400068836	Potato	cytosol	13.82	23.5
PGSC0003DMT400085031	Potato	cytosol	8.82	22.9
PGSC0003DMT400093314	Potato	cytosol	20.88	22.4
PGSC0003DMT400088765	Potato	cytosol	19.41	22.37
PGSC0003DMT400093361	Potato	cytosol	27.65	20.13
PGSC0003DMT400095744	Potato	cytosol	10.59	20.0
KXG36879	Sorghum	mitochondrion	21.47	16.4
OQU77179	Sorghum	mitochondrion	20.59	13.86
PGSC0003DMT400026622	Potato	cytosol	11.47	11.78
PGSC0003DMT400096524	Potato	cytosol, nucleus	30.88	9.45

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EntrezGene:8072042	UniProt:C5YFB2
EnsemblPlants:EES12063	ProteinID:EES12063	ProteinID:EES12063.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381
InterPro:IPT	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF37	MetaCyc:PWY-2781
EnsemblPlantsGene:SORBI_3006G059900	SUPFAM:SSF52540	UniParc:UPI0001A872D8	RefSeq:XP_002447735.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:41007893..41008915

Molecular Weight (calculated)

36086.9 Da

IEP (calculated)

4.763

GRAVY (calculated)

-0.011

Length

340 amino acids

Sequence
(BLAST)

001: MEHGVTATAA GKPKVVFVLG ATATGKSKLA IALAQRFNGE VINADKIQVH EGVPILTNKV TEEEQAGVPH HLLSVRDPDA EFPPEEFRRE AAGAIAGVLS
101: AGRLPIVAGG SNTYIEALVD GDGAAFRAAH DLLFVWVDAE RELLEWYAAL RVDEMVARGL VAEARAAFAG AGADYTRGVR RAIGLPEMHA YLMAERDVVG
201: AAGEADLAAM LERAVREIKD NTFRLARTQT EKIRRLSTLD GWDVRRIDVT PVFARKADGK ECHEQTWKKL VWEPCEEMVR AFLEPAPSLA AVPGVAATED
301: GDEGRDAGVV AAAAIAAPAA NVAPTGDVAN AVVADAAETI

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.