Factsheet for Solyc11g020400.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g019850.1.1	Tomato	cytosol	41.59	87.04
Solyc11g019880.1.1	Tomato	cytosol	86.73	80.99
Solyc11g063730.1.1	Tomato	cytosol	34.51	79.59
Solyc11g061800.1.1	Tomato	cytosol	33.63	76.0
Solyc11g061860.1.1	Tomato	cytosol	88.5	71.94
Solyc11g063470.1.1	Tomato	cytosol	32.74	68.52
Solyc08g061790.1.1	Tomato	cytosol	37.17	67.74
Solyc11g061780.1.1	Tomato	cytosol	31.86	65.45
Solyc11g027990.1.1	Tomato	cytosol	32.74	62.71
Solyc11g019900.1.1	Tomato	cytosol	31.86	61.02
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	84.96	53.33
Solyc11g020380.1.1	Tomato	cytosol	90.27	51.52
PGSC0003DMT400091824	Potato	cytosol, mitochondrion, nucleus	81.42	51.4
Solyc11g061900.1.1	Tomato	cytosol	87.61	50.25
Solyc11g063710.1.1	Tomato	cytosol	88.5	49.02
Solyc11g063740.1.1	Tomato	cytosol	88.5	49.02
Solyc11g061870.1.1	Tomato	cytosol	88.5	49.02
Solyc11g019890.1.1	Tomato	cytosol	87.61	48.29
Solyc11g061830.1.1	Tomato	cytosol	85.84	47.55
Solyc11g063690.1.1	Tomato	cytosol	66.37	47.17
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	82.3	45.37
Solyc08g061690.1.1	Tomato	cytosol	78.76	44.95
Solyc11g061890.1.1	Tomato	cytosol	41.59	37.9
PGSC0003DMT400091323	Potato	cytosol	45.13	34.69
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	88.5	32.89
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	51.33	22.48
Solyc09g064910.1.1	Tomato	mitochondrion	55.75	20.06
HORVU5Hr1G110100.1	Barley	mitochondrion	51.33	19.21
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	49.56	19.11
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	49.56	19.11
TraesCS5A01G181100.1	Wheat	mitochondrion	48.67	18.84
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	53.98	18.54
Zm00001d034584_P001	Maize	plastid	51.33	17.63
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	49.56	17.45
OQU90772	Sorghum	plastid	52.21	17.35
Os05t0311801-00	Rice	cytosol	52.21	17.3
Zm00001d005239_P001	Maize	plastid	53.1	17.29
TraesCS5D01G185500.1	Wheat	plastid	48.67	17.13
TraesCS5A01G460000.1	Wheat	plastid	53.1	17.09
KRH46921	Soybean	cytosol	44.25	17.06
HORVU3Hr1G025950.1	Barley	cytosol	52.21	17.05
Zm00001d040810_P001	Maize	cytosol	53.1	17.05
Solyc05g009410.1.1	Tomato	cytosol	42.48	16.96
EER96067	Sorghum	plastid	53.98	16.85
KRH01762	Soybean	extracellular, golgi, vacuole	49.56	16.82
Os03t0810100-01	Rice	extracellular	53.1	16.81
Zm00001d013021_P001	Maize	plastid	49.56	16.62
EES02950	Sorghum	cytosol	53.98	16.58
TraesCS5D01G471100.1	Wheat	cytosol	51.33	16.52
TraesCS5B01G469600.1	Wheat	cytosol	51.33	16.52
TraesCS3A01G136200.1	Wheat	mitochondrion	50.44	16.47
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	49.56	16.18
TraesCS3D01G137000.1	Wheat	cytosol, plastid	49.56	16.0
Zm00001d019171_P001	Maize	plastid	51.33	15.93
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	45.13	15.64
Os07t0211700-00	Rice	plastid	47.79	15.56
Os03t0356900-01	Rice	extracellular	43.36	15.08
TraesCS1B01G323900.1	Wheat	plastid	37.17	15.0
Os03t0358900-00	Rice	cytosol	43.36	14.94
Zm00001d003869_P001	Maize	cytosol	42.48	14.91
Solyc04g007240.1.1	Tomato	plastid	40.71	14.15
EES12063	Sorghum	cytosol	41.59	13.82
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	46.9	13.52
TraesCS1A01G057000.1	Wheat	cytosol	46.02	13.33
Solyc11g066960.1.1	Tomato	cytosol	46.02	11.13
Solyc12g014190.1.1	Tomato	mitochondrion	28.32	7.13

Protein Annotations

KEGG:00908+2.5.1.27	Gene3D:3.40.50.300	MapMan:50.2.5	GO:GO:0003674	GO:GO:0003824	GO:GO:0004161
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0006400	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0052381	UniProt:K4D6Z2	PFAM:PF01745	PANTHER:PTHR11088	PANTHER:PTHR11088:SF25	EnsemblPlantsGene:Solyc11g020400.1
EnsemblPlants:Solyc11g020400.1.1	InterPro:Tzs	UniParc:UPI00027694FD	:	:	:

Description

No Description!

Coordinates

chr11:+:11027519..11028436

Molecular Weight (calculated)

12666.2 Da

IEP (calculated)

6.534

GRAVY (calculated)

-0.374

Length

113 amino acids

Sequence
(BLAST)

001: MVATGTGKSR LSVDVATHFG GEIINSDKMQ VYKGLEIVIN KITHAEKQGL VDEVRQIFIP DVDYTKGIQR SIGVPETDRY LREETNIDGD NESKQMILQA
101: SISSIKRNTR MLI

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.