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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • plastid 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 71.17 85.58
TraesCS1A01G057000.1 Wheat cytosol 83.42 83.85
Os03t0356900-01 Rice extracellular 54.59 65.85
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 48.98 65.53
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 48.98 65.53
Os03t0358900-00 Rice cytosol 54.08 64.63
Zm00001d003869_P001 Maize cytosol 52.81 64.29
EES12063 Sorghum cytosol 52.55 60.59
Solyc11g027990.1.1 Tomato cytosol 8.93 59.32
Solyc11g063730.1.1 Tomato cytosol 7.4 59.18
Solyc08g061790.1.1 Tomato cytosol 8.93 56.45
Solyc11g019850.1.1 Tomato cytosol 7.65 55.56
Solyc11g061800.1.1 Tomato cytosol 6.89 54.0
Solyc11g019900.1.1 Tomato cytosol 7.91 52.54
Solyc11g063470.1.1 Tomato cytosol 7.14 51.85
Solyc11g061780.1.1 Tomato cytosol 7.14 50.91
HORVU5Hr1G110100.1 Barley mitochondrion 38.52 50.0
Solyc11g061860.1.1 Tomato cytosol 17.09 48.2
Solyc11g020400.1.1 Tomato cytosol 13.52 46.9
Solyc11g019880.1.1 Tomato cytosol 14.29 46.28
PGSC0003DMT400086561 Potato cytosol 11.99 46.08
PGSC0003DMT400087375 Potato cytosol 9.69 45.78
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 29.59 44.96
PGSC0003DMT400085022 Potato cytosol 31.12 44.53
PGSC0003DMT400097056 Potato mitochondrion 13.27 44.44
PGSC0003DMT400097535 Potato mitochondrion 19.39 43.68
HORVU3Hr1G025950.1 Barley cytosol 38.52 43.64
PGSC0003DMT400091323 Potato cytosol 16.33 43.54
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 12.5 43.36
PGSC0003DMT400088950 Potato cytosol 23.47 43.19
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 19.64 43.02
GSMUA_Achr5P07950_001 Banana cytosol 36.22 42.52
Solyc11g061870.1.1 Tomato cytosol 21.94 42.16
Solyc11g063710.1.1 Tomato cytosol 21.94 42.16
Solyc11g063740.1.1 Tomato cytosol 21.94 42.16
AT5G19040.1 Thale cress mitochondrion 35.46 42.12
PGSC0003DMT400092576 Potato cytosol 16.84 42.04
PGSC0003DMT400088039 Potato cytosol 15.05 41.84
Solyc11g020380.1.1 Tomato cytosol 20.92 41.41
CDX92563 Canola mitochondrion 35.2 41.32
CDY13945 Canola mitochondrion 34.95 41.02
Solyc11g063690.1.1 Tomato cytosol 16.58 40.88
VIT_07s0104g00270.t01 Wine grape cytosol, mitochondrion, plastid 33.42 40.81
PGSC0003DMT400087535 Potato cytosol 28.32 40.81
Bra002204.1-P Field mustard mitochondrion 34.69 40.72
Solyc11g061900.1.1 Tomato cytosol 20.41 40.61
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 17.35 40.48
CDY02590 Canola cytosol 34.44 40.42
PGSC0003DMT400097181 Potato cytosol 21.94 40.38
Bra023701.1-P Field mustard cytosol 33.93 40.18
CDY47191 Canola cytosol 33.93 40.18
Solyc08g061680.1.1 Tomato cytosol, mitochondrion, nucleus 20.92 40.0
Solyc11g019890.1.1 Tomato cytosol 20.92 40.0
VIT_05s0020g02630.t01 Wine grape cytosol 33.67 40.0
PGSC0003DMT400084902 Potato cytosol 17.86 39.77
Solyc11g061830.1.1 Tomato cytosol 20.66 39.71
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 22.45 39.64
PGSC0003DMT400097110 Potato cytosol 16.58 39.63
PGSC0003DMT400086959 Potato cytosol 8.16 39.51
PGSC0003DMT400090908 Potato cytosol 22.7 39.04
PGSC0003DMT400092830 Potato cytosol 15.82 38.99
PGSC0003DMT400091271 Potato cytosol 12.5 38.89
Solyc11g061810.1.1 Tomato cytosol, mitochondrion, nucleus 17.86 38.89
KRH71448 Soybean golgi, mitochondrion, plastid 32.4 38.84
KRH31999 Soybean mitochondrion 33.93 38.66
AT3G23630.1 Thale cress mitochondrion, plastid 32.4 38.6
KRH67172 Soybean plastid 30.36 38.51
PGSC0003DMT400088770 Potato cytosol 15.31 38.46
PGSC0003DMT400091399 Potato cytosol 14.03 38.46
VIT_09s0070g00710.t01 Wine grape mitochondrion 30.36 38.39
CDX93935 Canola plastid 32.65 38.32
KRH46921 Soybean cytosol 28.57 38.23
PGSC0003DMT400086264 Potato cytosol 27.3 38.08
PGSC0003DMT400096405 Potato cytosol 16.07 37.95
KRG95498 Soybean mitochondrion 29.85 37.74
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 12.76 37.59
AT3G63110.1 Thale cress plastid 32.14 37.5
Bra040431.1-P Field mustard mitochondrion, plastid 31.89 37.43
CDX89173 Canola mitochondrion, plastid 31.89 37.43
Bra007728.1-P Field mustard plastid 31.63 37.35
CDX77492 Canola plastid 31.63 37.35
CDX85119 Canola plastid 31.63 37.35
CDY63340 Canola plastid 31.63 37.35
CDY67797 Canola mitochondrion 31.63 37.35
Solyc09g064910.1.1 Tomato mitochondrion 29.85 37.26
PGSC0003DMT400088320 Potato cytosol 13.01 37.23
Bra014968.1-P Field mustard plastid 31.38 37.05
Solyc08g061690.1.1 Tomato cytosol 18.62 36.87
PGSC0003DMT400089640 Potato mitochondrion 23.98 36.43
PGSC0003DMT400088851 Potato cytosol 22.19 36.4
PGSC0003DMT400002509 Potato mitochondrion 29.59 36.36
PGSC0003DMT400087595 Potato cytosol 12.76 36.23
KRH01762 Soybean extracellular, golgi, vacuole 30.61 36.04
PGSC0003DMT400088899 Potato cytosol 20.41 36.04
KRH11376 Soybean extracellular 31.38 35.96
PGSC0003DMT400090073 Potato cytosol 22.19 35.8
KRH51017 Soybean plastid 30.61 35.71
Bra028326.1-P Field mustard plastid 27.3 35.55
Solyc11g061890.1.1 Tomato cytosol 11.22 35.48
KRH02126 Soybean plastid 30.61 35.29
Solyc01g080150.2.1 Tomato cytosol, extracellular, mitochondrion, plastid 29.59 35.26
PGSC0003DMT400083203 Potato cytosol 29.59 35.15
GSMUA_Achr3P09080_001 Banana extracellular 29.34 34.43
PGSC0003DMT400097346 Potato cytosol 11.73 34.33
PGSC0003DMT400090406 Potato cytosol 28.06 33.95
PGSC0003DMT400095880 Potato cytosol 11.48 33.83
PGSC0003DMT400086310 Potato cytosol 10.46 33.61
PGSC0003DMT400093701 Potato cytosol 21.17 33.33
CDY18104 Canola cytosol 23.98 33.22
KRH20915 Soybean cytosol 13.01 33.12
PGSC0003DMT400090690 Potato cytosol 11.73 33.09
PGSC0003DMT400088552 Potato cytosol 15.56 32.97
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 16.33 32.49
PGSC0003DMT400087380 Potato cytosol 13.52 31.55
PGSC0003DMT400093491 Potato cytosol 19.64 31.43
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 13.78 31.21
HORVU1Hr1G083530.2 Barley plastid 28.32 29.6
PGSC0003DMT400089330 Potato cytosol 20.92 28.87
HORVU0Hr1G006770.3 Barley cytosol 20.41 28.78
PGSC0003DMT400090318 Potato cytosol 7.4 27.88
PGSC0003DMT400096448 Potato cytosol 7.4 27.88
PGSC0003DMT400091817 Potato cytosol 10.71 27.63
PGSC0003DMT400092288 Potato cytosol 14.54 26.89
PGSC0003DMT400096037 Potato cytosol 6.89 26.73
Solyc11g019860.1.1 Tomato cytoskeleton, cytosol 20.66 26.64
PGSC0003DMT400086337 Potato cytosol 19.9 26.35
PGSC0003DMT400085014 Potato cytosol 15.05 26.34
PGSC0003DMT400087085 Potato cytosol 19.9 26.17
PGSC0003DMT400094882 Potato cytosol 14.8 25.78
PGSC0003DMT400085869 Potato cytosol 22.45 24.93
HORVU2Hr1G062320.8 Barley plastid 29.85 24.53
PGSC0003DMT400086709 Potato cytosol 15.82 24.31
PGSC0003DMT400095385 Potato cytosol 25.51 24.27
PGSC0003DMT400088765 Potato cytosol 18.11 24.07
PGSC0003DMT400085031 Potato cytosol 7.91 23.66
PGSC0003DMT400068836 Potato cytosol 11.99 23.5
PGSC0003DMT400090493 Potato cytosol 21.94 23.31
HORVU2Hr1G061960.1 Barley cytosol 11.48 21.63
HORVU2Hr1G061970.1 Barley cytosol 11.48 21.63
PGSC0003DMT400093314 Potato cytosol 17.35 21.45
PGSC0003DMT400093361 Potato cytosol 25.51 21.41
PGSC0003DMT400095744 Potato cytosol 9.69 21.11
HORVU7Hr1G120070.12 Barley mitochondrion 18.88 15.23
PGSC0003DMT400026622 Potato cytosol 11.48 13.6
PGSC0003DMT400096524 Potato cytosol, nucleus 27.81 9.81
Protein Annotations
EnsemblPlants:HORVU1Hr1G011480.1EnsemblPlantsGene:HORVU1Hr1G011480Gene3D:1.10.287.890Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75
PANTHER:PTHR11088PANTHER:PTHR11088:SF37PFAM:PF01715SEG:segSUPFAM:SSF52540UniParc:UPI0002948088
UniProt:M0UTK1MapMan:11.4.1.1::::
Description
No Description!
Coordinates
chrchr1H:+:27827676..27830691
Molecular Weight (calculated)
41175.6 Da
IEP (calculated)
4.567
GRAVY (calculated)
-0.058
Length
392 amino acids
Sequence
(BLAST)
001: MECKGVNGQS PKPKVVFVLG ATATGKSKLA ISLARRFGGE VINSDKIQVY DGVPILTNKV TEEESAGVPH HLLGGVHPDA DFTADDFRRV AEAAISRVIS
101: AGRLPVVAGG SNNYVEALVE ADGAAFRAAH DCLFLWLDAA PGLMEWYTGL RVDDMVRRGL VDETRAAFEE GADYTRGVRR AIGLPEMHEY LRAEREGAVG
201: AAEMAALLER AVREIKANTF GLVLQQAAKI RRLSTLEGWD VRRVDATAVF ASMAEGSGGH KEVWESAVWA PCQEMVRLFL HAEAATLPTD LEVDEAMAGL
301: SLGVSVIPVA AVGDVGDDDV SVVLTPPTVL HEHENEGSIN KDGAAGVVLN GTHDVVDKDP ACGGGDGEDH GSNAGVAQAA PAAAGAKPDD TA
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.