CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47191	Canola	cytosol	95.81	96.68
CDX92563	Canola	mitochondrion	89.52	89.52
CDY13945	Canola	mitochondrion	89.52	89.52
AT5G19040.1	Thale cress	mitochondrion	86.83	87.88
CDX85119	Canola	plastid	55.69	56.02
CDX77492	Canola	plastid	55.39	55.72
VIT_05s0020g02630.t01	Wine grape	cytosol	54.19	54.85
GSMUA_AchrUn_...	Banana	cytosol	43.41	50.7
KRH11376	Soybean	extracellular	51.5	50.29
HORVU5Hr1G110100.1	Barley	mitochondrion	45.21	50.0
CDX93935	Canola	plastid	49.1	49.1
KRH51017	Soybean	plastid	48.8	48.51
CDY18104	Canola	cytosol	41.02	48.41
KRH02126	Soybean	plastid	49.1	48.24
CDX89173	Canola	mitochondrion, plastid	48.2	48.2
CDY63340	Canola	plastid	47.6	47.89
CDY67797	Canola	mitochondrion	47.31	47.59
Zm00001d034584_P001	Maize	plastid	45.81	46.5
KRH20915	Soybean	cytosol	21.26	46.1
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	44.91	45.59
OQU90772	Sorghum	plastid	46.41	45.59
PGSC0003DMT400083203	Potato	cytosol	44.01	44.55
Zm00001d013021_P001	Maize	plastid	44.91	44.51
Os03t0810100-01	Rice	extracellular	47.01	43.98
TraesCS5A01G460000.1	Wheat	plastid	46.11	43.87
Zm00001d040810_P001	Maize	cytosol	46.11	43.75
TraesCS5D01G471100.1	Wheat	cytosol	45.21	43.02
Zm00001d005239_P001	Maize	plastid	44.61	42.94
EER96067	Sorghum	plastid	46.41	42.82
Os05t0311801-00	Rice	cytosol	43.71	42.82
TraesCS5B01G469600.1	Wheat	cytosol	44.91	42.73
Zm00001d019171_P001	Maize	plastid	46.41	42.58
TraesCS5A01G181100.1	Wheat	mitochondrion	37.13	42.47
Os07t0211700-00	Rice	plastid	44.01	42.36
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	36.83	41.98
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	36.83	41.98
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	43.41	41.91
EES02950	Sorghum	cytosol	45.81	41.58
TraesCS3D01G137000.1	Wheat	cytosol, plastid	43.11	41.14
HORVU3Hr1G025950.1	Barley	cytosol	42.52	41.04
TraesCS3A01G136200.1	Wheat	mitochondrion	42.52	41.04
Os03t0358900-00	Rice	cytosol	38.92	39.63
Zm00001d003869_P001	Maize	cytosol	38.02	39.44
Os03t0356900-01	Rice	extracellular	38.02	39.08
GSMUA_AchrUn_...	Banana	mitochondrion	40.72	38.97
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	38.02	38.96
CDY22984	Canola	plastid	35.63	38.76
TraesCS5D01G185500.1	Wheat	plastid	36.53	38.01
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	36.23	37.69
CDY07385	Canola	plastid	35.33	36.88
EES12063	Sorghum	cytosol	37.43	36.76
CDY04228	Canola	plastid	35.03	36.68
CDX95461	Canola	plastid	35.33	36.42
CDY44896	Canola	plastid	36.53	36.42
CDX82308	Canola	plastid	35.33	36.2
TraesCS1B01G323900.1	Wheat	plastid	30.24	36.07
CDY18571	Canola	plastid	34.73	35.8
CDX81518	Canola	plastid	37.13	35.63
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	40.42	34.44
TraesCS1A01G057000.1	Wheat	cytosol	39.82	34.1
CDY30532	Canola	cytosol	33.23	23.92
CDY45111	Canola	plastid	13.47	20.45
CDX77133	Canola	plastid	35.03	16.48
CDX88863	Canola	plastid	22.75	16.41
CDX70907	Canola	plastid	22.75	16.41

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	GO:A0A078EKP9	EnsemblPlants:CDY02590
ProteinID:CDY02590	ProteinID:CDY02590.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00114711001	InterPro:IPT
InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	MetaCyc:PWY-2781	SUPFAM:SSF52540
UniParc:UPI0004EE7E05	SEG:seg	:	:	:	:

Description

BnaC02g08450D

Coordinates

chrLK031936:+:264927..265931

Molecular Weight (calculated)

37847.6 Da

IEP (calculated)

5.953

GRAVY (calculated)

-0.197

Length

334 amino acids

Sequence
(BLAST)

001: MKPCMTALRQ AIPPLLNFKE ISTGLNMVDV PFFRRKDKVV FVMGATGTGK SRLAIDLATR FPAEIINSDK IQVYKGLDIV TNKVTPEESL GVPHHLLGTV
101: ENTHDDFMAE DFQRDAIRAV KSIVERDRVP IIAGGSNSYI EALVNNCVDF RLRYNCCFLW VDVDKPVLHS FVSERVDKMV EMGLVDEVRR IFDPSSSDYS
201: AGIRRAIGVP ELDEFLRAEL LNYPAETTEK LLETAIKKIK DSNCLLASRQ YQKIQRLYKQ WKWNMHRLDA TEVFLRRGEE ADDAWEDKVA RPSALAVDRF
301: LNYSEDHHLE GADILLPEIS VVPPLPAAVA AISR

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.