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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 6
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034584_P001 Maize plastid 87.94 90.88
Zm00001d013021_P001 Maize plastid 82.35 83.09
HORVU5Hr1G110100.1 Barley mitochondrion 69.71 78.48
TraesCS5D01G471100.1 Wheat cytosol 75.59 73.22
TraesCS5B01G469600.1 Wheat cytosol 75.29 72.93
TraesCS5A01G460000.1 Wheat plastid 74.71 72.36
Os03t0810100-01 Rice extracellular 73.82 70.31
Solyc11g019850.1.1 Tomato cytosol 10.0 62.96
EER96067 Sorghum plastid 65.59 61.6
Solyc11g027990.1.1 Tomato cytosol 10.59 61.02
Solyc11g061800.1.1 Tomato cytosol 8.82 60.0
Solyc08g061790.1.1 Tomato cytosol 10.88 59.68
Solyc11g063730.1.1 Tomato cytosol 8.53 59.18
Solyc11g019900.1.1 Tomato cytosol 9.71 55.93
Solyc11g020400.1.1 Tomato cytosol 17.35 52.21
Solyc11g061780.1.1 Tomato cytosol 8.24 50.91
PGSC0003DMT400087375 Potato cytosol 12.35 50.6
PGSC0003DMT400097056 Potato mitochondrion 17.35 50.43
PGSC0003DMT400091323 Potato cytosol 21.76 50.34
Solyc11g063470.1.1 Tomato cytosol 7.94 50.0
Solyc11g019880.1.1 Tomato cytosol 17.65 49.59
AT5G19040.1 Thale cress mitochondrion 47.94 49.39
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 37.35 49.22
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 25.59 48.6
Solyc11g061860.1.1 Tomato cytosol 19.71 48.2
VIT_07s0104g00270.t01 Wine grape cytosol, mitochondrion, plastid 45.0 47.66
PGSC0003DMT400088950 Potato cytosol 29.71 47.42
Bra023701.1-P Field mustard cytosol 45.59 46.83
CDY47191 Canola cytosol 45.59 46.83
PGSC0003DMT400085022 Potato cytosol 37.65 46.72
CDX92563 Canola mitochondrion 45.59 46.41
CDY02590 Canola cytosol 45.59 46.41
PGSC0003DMT400087535 Potato cytosol 37.06 46.32
Bra002204.1-P Field mustard mitochondrion 45.29 46.11
CDY13945 Canola mitochondrion 45.29 46.11
VIT_05s0020g02630.t01 Wine grape cytosol 44.71 46.06
PGSC0003DMT400097535 Potato mitochondrion 23.53 45.98
Solyc11g063740.1.1 Tomato cytosol 27.35 45.59
VIT_09s0070g00710.t01 Wine grape mitochondrion 41.47 45.48
CDX93935 Canola plastid 44.41 45.21
KRG95498 Soybean mitochondrion 41.18 45.16
PGSC0003DMT400086561 Potato cytosol 13.53 45.1
KRH67172 Soybean plastid 40.88 44.98
EES12063 Sorghum cytosol 44.71 44.71
PGSC0003DMT400088039 Potato cytosol 18.53 44.68
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 22.06 44.64
PGSC0003DMT400097110 Potato cytosol 21.47 44.51
Solyc11g020380.1.1 Tomato cytosol 25.88 44.44
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 14.71 44.25
Solyc11g061870.1.1 Tomato cytosol 26.47 44.12
PGSC0003DMT400091399 Potato cytosol 18.53 44.06
Bra040431.1-P Field mustard mitochondrion, plastid 43.24 44.01
CDX89173 Canola mitochondrion, plastid 43.24 44.01
Bra007728.1-P Field mustard plastid 42.94 43.98
CDY63340 Canola plastid 42.94 43.98
CDY67797 Canola mitochondrion 42.94 43.98
AT3G63110.1 Thale cress plastid 43.24 43.75
Solyc11g061900.1.1 Tomato cytosol 25.29 43.65
Solyc11g063710.1.1 Tomato cytosol 26.18 43.63
EES02950 Sorghum cytosol 47.06 43.48
PGSC0003DMT400092576 Potato cytosol 20.0 43.31
PGSC0003DMT400097181 Potato cytosol 27.06 43.19
AT3G23630.1 Thale cress mitochondrion, plastid 41.76 43.16
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 27.94 42.79
Solyc11g061810.1.1 Tomato cytosol, mitochondrion, nucleus 22.65 42.78
CDX77492 Canola plastid 41.76 42.77
PGSC0003DMT400092830 Potato cytosol 20.0 42.77
Solyc11g063690.1.1 Tomato cytosol 20.0 42.77
PGSC0003DMT400086264 Potato cytosol 35.29 42.7
Solyc11g061830.1.1 Tomato cytosol 25.59 42.65
Bra014968.1-P Field mustard plastid 41.47 42.47
CDX85119 Canola plastid 41.47 42.47
Solyc11g019890.1.1 Tomato cytosol 25.59 42.44
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 16.47 42.11
PGSC0003DMT400091271 Potato cytosol 15.59 42.06
PGSC0003DMT400084902 Potato cytosol 21.76 42.05
PGSC0003DMT400090908 Potato cytosol 27.94 41.67
KRH71448 Soybean golgi, mitochondrion, plastid 40.0 41.59
KRH02126 Soybean plastid 41.47 41.47
Solyc09g064910.1.1 Tomato mitochondrion 38.24 41.4
PGSC0003DMT400002509 Potato mitochondrion 38.82 41.38
Solyc11g061890.1.1 Tomato cytosol 15.0 41.13
Solyc08g061680.1.1 Tomato cytosol, mitochondrion, nucleus 24.71 40.98
PGSC0003DMT400088320 Potato cytosol 16.47 40.88
Solyc01g080150.2.1 Tomato cytosol, extracellular, mitochondrion, plastid 39.41 40.73
PGSC0003DMT400088851 Potato cytosol 28.53 40.59
PGSC0003DMT400088899 Potato cytosol 26.47 40.54
KRH51017 Soybean plastid 40.0 40.48
KRH31999 Soybean mitochondrion 40.88 40.41
PGSC0003DMT400088770 Potato cytosol 18.53 40.38
PGSC0003DMT400083203 Potato cytosol 39.12 40.3
Bra028326.1-P Field mustard plastid 35.59 40.2
PGSC0003DMT400089640 Potato mitochondrion 30.29 39.92
PGSC0003DMT400090073 Potato cytosol 28.53 39.92
PGSC0003DMT400096405 Potato cytosol 19.41 39.76
KRH11376 Soybean extracellular 39.71 39.47
PGSC0003DMT400086959 Potato cytosol 9.12 38.27
CDY18104 Canola cytosol 31.76 38.16
PGSC0003DMT400090406 Potato cytosol 36.18 37.96
PGSC0003DMT400087595 Potato cytosol 15.29 37.68
Solyc08g061690.1.1 Tomato cytosol 21.76 37.37
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 21.47 37.06
PGSC0003DMT400086310 Potato cytosol 13.24 36.89
PGSC0003DMT400093491 Potato cytosol 26.47 36.73
PGSC0003DMT400093701 Potato cytosol 26.76 36.55
KRH46921 Soybean cytosol 31.18 36.18
KRH01762 Soybean extracellular, golgi, vacuole 35.29 36.04
PGSC0003DMT400097346 Potato cytosol 14.12 35.82
PGSC0003DMT400095880 Potato cytosol 13.82 35.34
PGSC0003DMT400090690 Potato cytosol 14.41 35.25
PGSC0003DMT400087380 Potato cytosol 17.35 35.12
KRH20915 Soybean cytosol 15.88 35.06
KXG33157 Sorghum mitochondrion, plastid 38.53 35.03
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 17.06 33.53
PGSC0003DMT400088552 Potato cytosol 18.24 33.51
PGSC0003DMT400089330 Potato cytosol 27.35 32.75
PGSC0003DMT400090318 Potato cytosol 9.71 31.73
PGSC0003DMT400096037 Potato cytosol 9.41 31.68
KXG22495 Sorghum mitochondrion 36.18 31.62
PGSC0003DMT400091817 Potato cytosol 14.12 31.58
PGSC0003DMT400086337 Potato cytosol 25.29 29.05
PGSC0003DMT400085014 Potato cytosol 19.12 29.02
Solyc11g019860.1.1 Tomato cytoskeleton, cytosol 25.88 28.95
PGSC0003DMT400096448 Potato cytosol 8.82 28.85
PGSC0003DMT400087085 Potato cytosol 25.0 28.52
PGSC0003DMT400095385 Potato cytosol 33.24 27.43
PGSC0003DMT400092288 Potato cytosol 17.06 27.36
PGSC0003DMT400086709 Potato cytosol 20.29 27.06
PGSC0003DMT400094882 Potato cytosol 17.65 26.67
EES02135 Sorghum cytosol, plastid 36.47 26.44
PGSC0003DMT400085869 Potato cytosol 27.35 26.35
PGSC0003DMT400090493 Potato cytosol 27.35 25.2
PGSC0003DMT400085031 Potato cytosol 9.71 25.19
PGSC0003DMT400095744 Potato cytosol 13.24 25.0
PGSC0003DMT400068836 Potato cytosol 14.41 24.5
PGSC0003DMT400088765 Potato cytosol 20.29 23.39
PGSC0003DMT400093314 Potato cytosol 21.76 23.34
PGSC0003DMT400093361 Potato cytosol 30.59 22.27
KXG36879 Sorghum mitochondrion 25.29 19.33
OQU77179 Sorghum mitochondrion 24.41 16.44
PGSC0003DMT400026622 Potato cytosol 13.24 13.6
PGSC0003DMT400096524 Potato cytosol, nucleus 36.18 11.07
Protein Annotations
EnsemblPlants:OQU90772EnsemblPlantsGene:SORBI_3001G042901Gene3D:1.10.287.890Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75
PANTHER:PTHR11088PANTHER:PTHR11088:SF41PFAM:PF01715ProteinID:OQU90772ProteinID:OQU90772.1SEG:seg
SUPFAM:SSF52540UniParc:UPI000B8BB178UniProt:A0A1Z5S496MapMan:11.4.1.1::
Description
hypothetical protein
Coordinates
chr1:-:3217954..3219890
Molecular Weight (calculated)
36751.4 Da
IEP (calculated)
9.084
GRAVY (calculated)
0.016
Length
340 amino acids
Sequence
(BLAST)
001: MPLSMAAPAM AAPPACFPMA ARLPPLPTSI TLPDAATPVP VVGCRRVAAK HKAVVVLGAT GTGKSRLAID LALRFGGEVI NSDKIQAYAG LDVATNKIGP
101: AECAGVAHHL LGVVHPDAEF TAADFRREAA RAAAGVASRG RVPIIAGGSN SYVEELVEGD RRAFRERYEC CFLWVDAKLP VLHDFVARRV DEMCRRGLVD
201: EVAAAFDPRR TDYSRGIWRA IGVPELDAYL RARGHDDEQR ARMLVAAVDE IKVNTSRLAL RQRGKIQRLA RMWRVRRVDA TEVFLKRGHA ADEAWQRLVA
301: APCIDAVRSF LQEDQEYSSM VTASMFASTA AAAAIAAAAV
Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)
001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR
Arabidopsis Description
IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.