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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 3
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400091399 Potato cytosol 51.76 92.31
PGSC0003DMT400097056 Potato mitochondrion 39.61 86.32
PGSC0003DMT400086561 Potato cytosol 32.94 82.35
PGSC0003DMT400088039 Potato cytosol 45.49 82.27
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 35.29 79.65
PGSC0003DMT400087375 Potato cytosol 25.88 79.52
PGSC0003DMT400097110 Potato cytosol 50.59 78.66
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 49.8 75.6
PGSC0003DMT400092288 Potato cytosol 60.39 72.64
PGSC0003DMT400091323 Potato cytosol 41.57 72.11
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 33.33 63.91
PGSC0003DMT400097181 Potato cytosol 50.98 61.03
PGSC0003DMT400096405 Potato cytosol 39.22 60.24
PGSC0003DMT400088552 Potato cytosol 42.75 58.92
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 44.71 57.87
PGSC0003DMT400088770 Potato cytosol 34.9 57.05
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 49.41 56.76
PGSC0003DMT400088950 Potato cytosol 45.88 54.93
PGSC0003DMT400088765 Potato cytosol 61.57 53.22
PGSC0003DMT400092830 Potato cytosol 31.76 50.94
PGSC0003DMT400084902 Potato cytosol 31.76 46.02
PGSC0003DMT400097535 Potato mitochondrion 30.59 44.83
PGSC0003DMT400086264 Potato cytosol 48.24 43.77
PGSC0003DMT400087535 Potato cytosol 46.27 43.38
PGSC0003DMT400092576 Potato cytosol 25.88 42.04
PGSC0003DMT400090908 Potato cytosol 35.69 39.91
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 26.27 38.73
PGSC0003DMT400089330 Potato cytosol 42.35 38.03
PGSC0003DMT400089640 Potato mitochondrion 38.04 37.6
PGSC0003DMT400088851 Potato cytosol 34.9 37.24
PGSC0003DMT400093314 Potato cytosol 43.92 35.33
PGSC0003DMT400085014 Potato cytosol 30.98 35.27
PGSC0003DMT400085022 Potato cytosol 37.65 35.04
PGSC0003DMT400090406 Potato cytosol 43.92 34.57
PGSC0003DMT400087380 Potato cytosol 22.75 34.52
PGSC0003DMT400093701 Potato cytosol 33.33 34.14
PGSC0003DMT400085869 Potato cytosol 47.06 33.99
PGSC0003DMT400085031 Potato cytosol 17.25 33.59
PGSC0003DMT400093491 Potato cytosol 31.76 33.06
PGSC0003DMT400088899 Potato cytosol 28.63 32.88
PGSC0003DMT400090073 Potato cytosol 30.98 32.51
PGSC0003DMT400086337 Potato cytosol 37.25 32.09
PGSC0003DMT400090493 Potato cytosol 45.49 31.44
PGSC0003DMT400087085 Potato cytosol 35.29 30.2
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 29.02 28.68
PGSC0003DMT400093361 Potato cytosol 51.37 28.05
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 19.22 27.37
PGSC0003DMT400095385 Potato cytosol 43.14 26.7
PGSC0003DMT400037749 Potato cytosol 27.06 24.38
PGSC0003DMT400026622 Potato cytosol 31.37 24.17
KRH01762 Soybean extracellular, golgi, vacuole 31.37 24.02
KRH46921 Soybean cytosol 27.06 23.55
PGSC0003DMT400015411 Potato cytosol 25.1 23.02
PGSC0003DMT400002509 Potato mitochondrion 28.63 22.88
HORVU5Hr1G110100.1 Barley mitochondrion 27.06 22.85
PGSC0003DMT400083203 Potato cytosol 28.63 22.12
TraesCS5A01G181100.1 Wheat mitochondrion 25.1 21.92
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 25.1 21.84
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 25.1 21.84
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 26.67 21.18
TraesCS1B01G323900.1 Wheat plastid 23.14 21.07
TraesCS5D01G185500.1 Wheat plastid 25.88 20.56
Zm00001d034584_P001 Maize plastid 26.27 20.36
OQU90772 Sorghum plastid 27.06 20.29
TraesCS5A01G460000.1 Wheat plastid 27.84 20.23
TraesCS5B01G469600.1 Wheat cytosol 27.84 20.23
TraesCS5D01G471100.1 Wheat cytosol 27.45 19.94
PGSC0003DMT400088320 Potato cytosol 10.59 19.71
Os03t0356900-01 Rice extracellular 25.1 19.69
Zm00001d003869_P001 Maize cytosol 24.71 19.57
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 24.71 19.33
Zm00001d040810_P001 Maize cytosol 26.67 19.32
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 25.88 19.08
Os05t0311801-00 Rice cytosol 25.49 19.06
Zm00001d013021_P001 Maize plastid 25.1 18.99
TraesCS3D01G137000.1 Wheat cytosol, plastid 25.88 18.86
EER96067 Sorghum plastid 26.67 18.78
Os03t0810100-01 Rice extracellular 26.27 18.77
EES02950 Sorghum cytosol 27.06 18.75
Os03t0358900-00 Rice cytosol 23.92 18.6
HORVU3Hr1G025950.1 Barley cytosol 25.1 18.5
TraesCS3A01G136200.1 Wheat mitochondrion 25.1 18.5
PGSC0003DMT400068271 Potato cytosol 27.45 18.47
Zm00001d005239_P001 Maize plastid 25.1 18.44
Os07t0211700-00 Rice plastid 24.71 18.16
Zm00001d019171_P001 Maize plastid 25.88 18.13
EES12063 Sorghum cytosol 23.92 17.94
TraesCS1A01G057000.1 Wheat cytosol 25.49 16.67
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 24.31 15.82
PGSC0003DMT400094882 Potato cytosol 10.98 12.44
PGSC0003DMT400096524 Potato cytosol, nucleus 44.31 10.17
PGSC0003DMT400039795 Potato mitochondrion 17.25 9.78
PGSC0003DMT400086959 Potato cytosol 1.57 4.94
PGSC0003DMT400068836 Potato cytosol 3.53 4.5
PGSC0003DMT400095744 Potato cytosol 1.96 2.78
PGSC0003DMT400090690 Potato cytosol 1.18 2.16
PGSC0003DMT400091271 Potato cytosol 0.78 1.59
PGSC0003DMT400097346 Potato cytosol 0.78 1.49
PGSC0003DMT400087595 Potato cytosol 0.78 1.45
PGSC0003DMT400091817 Potato cytosol 0.78 1.32
PGSC0003DMT400096037 Potato cytosol 0.39 0.99
PGSC0003DMT400086310 Potato cytosol 0.39 0.82
PGSC0003DMT400095880 Potato cytosol 0.39 0.75
PGSC0003DMT400090318 Potato cytosol 0.0 0.0
PGSC0003DMT400096448 Potato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400086709EnsemblPlantsGene:PGSC0003DMG400036280Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseInterPro:Sigma_54_int_dom_ATP-bd_1KEGG:00908+2.5.1.75
PANTHER:PTHR11088PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400036280ScanProsite:PS00675SEG:seg
SUPFAM:SSF52540UniParc:UPI0002965362UniProt:M1DCC4MapMan:11.4.1.1::
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400036280]
Coordinates
chr00:-:711356..714289
Molecular Weight (calculated)
29585.9 Da
IEP (calculated)
7.884
GRAVY (calculated)
-0.197
Length
255 amino acids
Sequence
(BLAST)
001: MGATGTGKYR FSIELTTHFR EELINSDKMQ VYKGLDIVTS KITHAEKQGV RHYLLGEIEK DSYFKAEDFC QKSIVYIENI LKTQCVLIIV AKMNTFINNN
101: NKFNKKKVVF IMGETGTGKS RLSIDLTTHF REEIINSDKM QVYKGLDIVT SKITHAEKQG VRHYLLGEIE KDSDFKAEDF CLKFIFYIEN ILKTQCVLII
201: VGGSNSYIEK IVEDPVFMFK YKYDSCFIWT DVDQSALNRR VYTMVDEMVN KLSFL
Best Arabidopsis Sequence Match ( AT5G19040.1 )
(BLAST)
001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR
Arabidopsis Description
IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.