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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400092830 Potato cytosol 43.24 80.5
PGSC0003DMT400088770 Potato cytosol 41.55 78.85
PGSC0003DMT400092576 Potato cytosol 39.53 74.52
PGSC0003DMT400086959 Potato cytosol 19.26 70.37
PGSC0003DMT400088950 Potato cytosol 50.34 69.95
PGSC0003DMT400090908 Potato cytosol 52.7 68.42
PGSC0003DMT400088851 Potato cytosol 55.07 68.2
PGSC0003DMT400097056 Potato mitochondrion 26.35 66.67
PGSC0003DMT400097181 Potato cytosol 47.64 66.2
PGSC0003DMT400091323 Potato cytosol 32.09 64.63
PGSC0003DMT400091399 Potato cytosol 31.08 64.34
PGSC0003DMT400088320 Potato cytosol 29.73 64.23
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 47.64 63.51
PGSC0003DMT400084902 Potato cytosol 37.16 62.5
PGSC0003DMT400087535 Potato cytosol 57.09 62.13
PGSC0003DMT400097110 Potato cytosol 32.77 59.15
PGSC0003DMT400093491 Potato cytosol 48.31 58.37
PGSC0003DMT400096405 Potato cytosol 32.09 57.23
PGSC0003DMT400088039 Potato cytosol 27.03 56.74
PGSC0003DMT400097535 Potato mitochondrion 32.77 55.75
PGSC0003DMT400086264 Potato cytosol 52.7 55.52
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 36.49 54.82
PGSC0003DMT400091271 Potato cytosol 22.97 53.97
PGSC0003DMT400085014 Potato cytosol 40.2 53.12
PGSC0003DMT400087085 Potato cytosol 53.38 53.02
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 30.07 52.98
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 31.42 51.96
PGSC0003DMT400089330 Potato cytosol 49.32 51.41
PGSC0003DMT400089640 Potato mitochondrion 44.26 50.78
PGSC0003DMT400087375 Potato cytosol 14.19 50.6
PGSC0003DMT400086310 Potato cytosol 20.27 49.18
PGSC0003DMT400088899 Potato cytosol 36.49 48.65
PGSC0003DMT400093701 Potato cytosol 40.2 47.79
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 18.24 47.79
PGSC0003DMT400090073 Potato cytosol 39.19 47.74
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 21.28 47.37
PGSC0003DMT400085869 Potato cytosol 55.41 46.46
PGSC0003DMT400097346 Potato cytosol 20.61 45.52
PGSC0003DMT400090406 Potato cytosol 49.32 45.06
PGSC0003DMT400085022 Potato cytosol 40.88 44.16
PGSC0003DMT400091817 Potato cytosol 22.64 44.08
PGSC0003DMT400095880 Potato cytosol 19.59 43.61
PGSC0003DMT400087595 Potato cytosol 20.27 43.48
PGSC0003DMT400088552 Potato cytosol 27.03 43.24
PGSC0003DMT400086561 Potato cytosol 14.86 43.14
PGSC0003DMT400090690 Potato cytosol 19.26 41.01
PGSC0003DMT400096448 Potato cytosol 13.51 38.46
PGSC0003DMT400086709 Potato cytosol 32.09 37.25
PGSC0003DMT400094882 Potato cytosol 28.04 36.89
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 21.28 36.42
PGSC0003DMT400095385 Potato cytosol 50.68 36.41
PGSC0003DMT400090493 Potato cytosol 44.93 36.04
PGSC0003DMT400092288 Potato cytosol 25.0 34.91
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 30.41 34.88
PGSC0003DMT400096037 Potato cytosol 11.82 34.65
PGSC0003DMT400093314 Potato cytosol 35.81 33.44
PGSC0003DMT400068836 Potato cytosol 21.96 32.5
PGSC0003DMT400090318 Potato cytosol 11.15 31.73
PGSC0003DMT400093361 Potato cytosol 49.66 31.48
PGSC0003DMT400088765 Potato cytosol 28.38 28.47
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 28.04 28.33
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 28.04 28.33
TraesCS5A01G181100.1 Wheat mitochondrion 27.7 28.08
HORVU5Hr1G110100.1 Barley mitochondrion 28.38 27.81
PGSC0003DMT400002509 Potato mitochondrion 29.73 27.59
KRH46921 Soybean cytosol 27.03 27.3
PGSC0003DMT400037749 Potato cytosol 25.68 26.86
KRH01762 Soybean extracellular, golgi, vacuole 30.07 26.73
Zm00001d034584_P001 Maize plastid 29.39 26.44
PGSC0003DMT400087380 Potato cytosol 14.86 26.19
PGSC0003DMT400085031 Potato cytosol 11.49 25.95
PGSC0003DMT400083203 Potato cytosol 28.72 25.76
TraesCS5D01G185500.1 Wheat plastid 27.7 25.55
PGSC0003DMT400015411 Potato cytosol 23.99 25.54
EER96067 Sorghum plastid 31.08 25.41
OQU90772 Sorghum plastid 29.05 25.29
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 27.36 25.23
Zm00001d005239_P001 Maize plastid 29.39 25.07
HORVU3Hr1G025950.1 Barley cytosol 29.05 24.86
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 28.72 24.57
TraesCS5A01G460000.1 Wheat plastid 29.05 24.5
PGSC0003DMT400095744 Potato cytosol 14.86 24.44
Zm00001d040810_P001 Maize cytosol 29.05 24.43
Os03t0358900-00 Rice cytosol 26.69 24.09
Os05t0311801-00 Rice cytosol 27.7 24.05
Os03t0356900-01 Rice extracellular 26.35 24.0
TraesCS5B01G469600.1 Wheat cytosol 28.38 23.93
TraesCS5D01G471100.1 Wheat cytosol 28.38 23.93
Zm00001d013021_P001 Maize plastid 27.03 23.74
Os03t0810100-01 Rice extracellular 28.38 23.53
TraesCS3D01G137000.1 Wheat cytosol, plastid 27.7 23.43
TraesCS3A01G136200.1 Wheat mitochondrion 27.36 23.41
EES02950 Sorghum cytosol 29.05 23.37
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 25.68 23.31
Zm00001d003869_P001 Maize cytosol 25.34 23.29
Zm00001d019171_P001 Maize plastid 28.38 23.08
Os07t0211700-00 Rice plastid 26.69 22.77
EES12063 Sorghum cytosol 25.0 21.76
TraesCS1B01G323900.1 Wheat plastid 19.59 20.71
TraesCS1A01G057000.1 Wheat cytosol 27.03 20.51
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 26.35 19.9
PGSC0003DMT400068271 Potato cytosol 22.3 17.41
PGSC0003DMT400096524 Potato cytosol, nucleus 55.74 14.85
PGSC0003DMT400026622 Potato cytosol 14.53 12.99
PGSC0003DMT400039795 Potato mitochondrion 14.53 9.56
Protein Annotations
EnsemblPlants:PGSC0003DMT400086337EnsemblPlantsGene:PGSC0003DMG400035908Gene3D:3.40.50.300GO:GO:0005575GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021InterPro:IPT
KEGG:00908+2.5.1.75PANTHER:PTHR11088PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400035908TMHMM:TMhelix
UniParc:UPI000294C01DUniProt:M1DBI6MapMan:11.4.1.1:::
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400035908]
Coordinates
chr4:-:34368351..34371948
Molecular Weight (calculated)
33274.2 Da
IEP (calculated)
5.640
GRAVY (calculated)
0.004
Length
296 amino acids
Sequence
(BLAST)
001: MNSDKMQVYK GLEIVTNNIT HDEKQGLRHY LLGESETDSD FTTEDFCLKS IVYIEKNLKT QCVPIIVGGS NSYIEKLVED HVFMFKYKYD SCFIWIDVEQ
101: SVLNRKVDTM VDEMVNVGLV DEVWQIFIPD ADYTKGIQRS IGVPEMARYL REVKNIDGDD ESKKVILQAS ISSIKHCAAE DCSATLVEIA DELGDPPFGQ
201: LIAFSVLPLA SSHSGSLRGT VLLRGTDRRP ADCSFPCLLI HFLQGFAYWN KGRLMSFRLL AKLNSAIRKI PFLVLFSPIC SVLLLSVHGS IKTSNT
Best Arabidopsis Sequence Match ( AT5G19040.1 )
(BLAST)
001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR
Arabidopsis Description
IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.