Factsheet for PGSC0003DMT400095385

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088950	Potato	cytosol	48.06	92.96
PGSC0003DMT400091323	Potato	cytosol	32.77	91.84
PGSC0003DMT400092576	Potato	cytosol	34.95	91.72
PGSC0003DMT400090908	Potato	cytosol	48.79	88.16
PGSC0003DMT400086959	Potato	cytosol	17.23	87.65
PGSC0003DMT400084902	Potato	cytosol	36.65	85.8
PGSC0003DMT400088320	Potato	cytosol	28.4	85.4
PGSC0003DMT400092830	Potato	cytosol	32.77	84.91
PGSC0003DMT400087535	Potato	cytosol	55.83	84.56
PGSC0003DMT400097056	Potato	mitochondrion	23.06	81.2
PGSC0003DMT400097535	Potato	mitochondrion	33.98	80.46
PGSC0003DMT400094689	Potato	cytosol, mitochondrion, peroxisome	43.2	80.18
PGSC0003DMT400091271	Potato	cytosol	24.51	80.16
PGSC0003DMT400088851	Potato	cytosol	46.36	79.92
PGSC0003DMT400087375	Potato	cytosol	16.02	79.52
PGSC0003DMT400091824	Potato	cytosol, mitochondrion, nucleus	34.47	79.33
PGSC0003DMT400088770	Potato	cytosol	29.85	78.85
PGSC0003DMT400097181	Potato	cytosol	40.05	77.46
PGSC0003DMT400097110	Potato	cytosol	30.83	77.44
PGSC0003DMT400086264	Potato	cytosol	52.67	77.22
PGSC0003DMT400090456	Potato	cytosol, mitochondrion, plastid	20.63	75.22
PGSC0003DMT400089640	Potato	mitochondrion	46.6	74.42
PGSC0003DMT400091399	Potato	cytosol	25.73	74.13
PGSC0003DMT400086310	Potato	cytosol	21.84	73.77
PGSC0003DMT400086561	Potato	cytosol	18.2	73.53
PGSC0003DMT400096405	Potato	cytosol	29.61	73.49
PGSC0003DMT400093491	Potato	cytosol	43.2	72.65
PGSC0003DMT400088039	Potato	cytosol	24.27	70.92
PGSC0003DMT400088899	Potato	cytosol	36.41	67.57
PGSC0003DMT400093701	Potato	cytosol	40.78	67.47
PGSC0003DMT400090073	Potato	cytosol	39.56	67.08
PGSC0003DMT400093770	Potato	cytosol, mitochondrion, plastid	31.8	66.5
PGSC0003DMT400085545	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	26.46	64.88
PGSC0003DMT400094329	Potato	cytosol, mitochondrion, nucleus	20.87	64.66
PGSC0003DMT400090406	Potato	cytosol	48.54	61.73
PGSC0003DMT400088552	Potato	cytosol	26.94	60.0
PGSC0003DMT400089330	Potato	cytosol	41.26	59.86
PGSC0003DMT400085022	Potato	cytosol	39.32	59.12
PGSC0003DMT400096448	Potato	cytosol	14.81	58.65
PGSC0003DMT400097346	Potato	cytosol	18.93	58.21
PGSC0003DMT400087085	Potato	cytosol	41.02	56.71
PGSC0003DMT400095880	Potato	cytosol	17.96	55.64
PGSC0003DMT400091817	Potato	cytosol	20.39	55.26
PGSC0003DMT400087595	Potato	cytosol	18.45	55.07
PGSC0003DMT400085014	Potato	cytosol	29.85	54.91
PGSC0003DMT400096037	Potato	cytosol	13.35	54.46
PGSC0003DMT400090690	Potato	cytosol	17.96	53.24
PGSC0003DMT400090318	Potato	cytosol	12.86	50.96
PGSC0003DMT400086337	Potato	cytosol	36.41	50.68
PGSC0003DMT400068919	Potato	cytosol, mitochondrion, nucleus	19.9	47.4
PGSC0003DMT400090493	Potato	cytosol	41.75	46.61
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	29.13	46.51
PGSC0003DMT400087380	Potato	cytosol	18.2	44.64
PGSC0003DMT400085869	Potato	cytosol	37.38	43.63
PGSC0003DMT400085031	Potato	cytosol	13.84	43.51
PGSC0003DMT400086709	Potato	cytosol	26.7	43.14
PGSC0003DMT400094882	Potato	cytosol	23.54	43.11
PGSC0003DMT400068836	Potato	cytosol	20.87	43.0
PGSC0003DMT400092288	Potato	cytosol	21.6	41.98
PGSC0003DMT400093314	Potato	cytosol	31.07	40.38
PGSC0003DMT400002509	Potato	mitochondrion	30.1	38.87
PGSC0003DMT400093361	Potato	cytosol	43.93	38.76
PGSC0003DMT400095744	Potato	cytosol	16.75	38.33
PGSC0003DMT400088765	Potato	cytosol	26.7	37.29
HORVU5Hr1G110100.1	Barley	mitochondrion	26.7	36.42
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	25.0	35.15
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	25.0	35.15
PGSC0003DMT400037749	Potato	cytosol	24.03	34.98
TraesCS5A01G181100.1	Wheat	mitochondrion	24.76	34.93
PGSC0003DMT400015411	Potato	cytosol	23.54	34.89
KRH46921	Soybean	cytosol	24.76	34.81
PGSC0003DMT400083203	Potato	cytosol	27.67	34.55
KRH01762	Soybean	extracellular, golgi, vacuole	27.67	34.23
Zm00001d034584_P001	Maize	plastid	27.18	34.04
OQU90772	Sorghum	plastid	27.43	33.24
Zm00001d005239_P001	Maize	plastid	27.91	33.14
EER96067	Sorghum	plastid	28.64	32.6
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	25.0	32.09
TraesCS5A01G460000.1	Wheat	plastid	27.18	31.91
TraesCS5D01G185500.1	Wheat	plastid	24.76	31.78
Zm00001d013021_P001	Maize	plastid	25.97	31.75
TraesCS5B01G469600.1	Wheat	cytosol	26.94	31.62
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	26.46	31.5
TraesCS5D01G471100.1	Wheat	cytosol	26.7	31.34
HORVU3Hr1G025950.1	Barley	cytosol	26.21	31.21
Os03t0810100-01	Rice	extracellular	26.7	30.81
Zm00001d019171_P001	Maize	plastid	27.18	30.77
Zm00001d040810_P001	Maize	cytosol	26.21	30.68
TraesCS3D01G137000.1	Wheat	cytosol, plastid	25.97	30.57
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	24.03	30.37
Os03t0356900-01	Rice	extracellular	23.79	30.15
Zm00001d003869_P001	Maize	cytosol	23.54	30.12
EES02950	Sorghum	cytosol	26.7	29.89
Os03t0358900-00	Rice	cytosol	23.79	29.88
TraesCS3A01G136200.1	Wheat	mitochondrion	25.0	29.77
Os07t0211700-00	Rice	plastid	25.0	29.68
Os05t0311801-00	Rice	cytosol	24.51	29.62
EES12063	Sorghum	cytosol	23.54	28.53
PGSC0003DMT400068271	Potato	cytosol	24.03	26.12
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	24.27	25.51
TraesCS1A01G057000.1	Wheat	cytosol	24.03	25.38
TraesCS1B01G323900.1	Wheat	plastid	16.99	25.0
PGSC0003DMT400096524	Potato	cytosol, nucleus	55.1	20.43
PGSC0003DMT400026622	Potato	cytosol	15.29	19.03
PGSC0003DMT400039795	Potato	mitochondrion	14.08	12.89

Protein Annotations

EnsemblPlants:PGSC0003DMT400095385	EnsemblPlantsGene:PGSC0003DMG400044956	Gene3D:3.40.50.300	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	InterPro:IPT	InterPro:P-loop_NTPase	KEGG:00908+2.5.1.75	PANTHER:PTHR11088
PANTHER:PTHR11088:SF49	PFAM:PF01715	PGSC:PGSC0003DMG400044956	SUPFAM:SSF52540	UniParc:UPI000295BE72	UniProt:M1DW68
MapMan:11.4.1.1	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400044956]

Coordinates

chr00:+:36313955..36317453

Molecular Weight (calculated)

47087.0 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.255

Length

412 amino acids

Sequence
(BLAST)

001: MGTIGTGKSR LSVDLATHFR GEIINSDKMQ VYKGLEIVTN KITHAEKQGV RHYLLGEIEP DSNFTAKDFC LKSNIYIETI LKAQCVPIIV GGLNSYIEKL
101: VEDPEFMFKH KYYGCFIWID VEQSVLNSRV DTRVNEMVNA GLVDEVRQIF IPDADYTKGI RLTIGVPEMA KYLMEEKNID GDDESKKMIL QASISSIKRE
201: IVPDSNFTAK DFCLKSNIYI ETILKAQFVP IIVGGSNSYI EILVEDPVFM FKHKYYGCII WIDVEQSVLN SRVDTRVDEM VNADYTTGIR LSIGVPEIAK
301: YLMQEKNIDG DDESKKMILQ ASISSIKRNT RILICNQLDK IQRLINEKMW SVHHIIATDV FKENRKEVVD EAWRMSHPKS GCDGTCPFPT GHVSLTQPQL
401: YRSRNMRIKD NK

Best Arabidopsis Sequence Match ( AT3G23630.1 )
(BLAST)

001: MKFSISSLKQ VQPILCFKNK LSKVNVNSFL HPKEKVIFVM GATGSGKSRL AIDLATRFQG EIINSDKIQL YKGLDVLTNK VTPKECRGVP HHLLGVFDSE
101: AGNLTATQYS RLASQAISKL SANNKLPIVA GGSNSYIEAL VNHSSGFLLN NYDCCFIWVD VSLPVLNSFV SKRVDRMMEA GLLEEVREVF NPKANYSVGI
201: RRAIGVPELH EYLRNESLVD RATKSKMLDV AVKNIKKNTE ILACRQLKKI QRLHKKWKMS MHRVDATEVF LKRNVEEQDE AWENLVARPS ERIVDKFYNN
301: NNQLKNDDVE HCLAASYGGG SGSRAHNMI

Arabidopsis Description

IPT7Adenylate isopentenyltransferase 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94ID1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.