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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 3
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, mitochondrion, peroxisome, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g019850.1.1 Tomato cytosol 16.61 90.74
PGSC0003DMT400086561 Potato cytosol 29.83 86.27
PGSC0003DMT400087375 Potato cytosol 24.07 85.54
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 29.83 77.88
PGSC0003DMT400092288 Potato cytosol 48.14 66.98
PGSC0003DMT400088039 Potato cytosol 31.19 65.25
PGSC0003DMT400086709 Potato cytosol 53.22 61.57
PGSC0003DMT400097056 Potato mitochondrion 24.41 61.54
PGSC0003DMT400097181 Potato cytosol 43.39 60.09
PGSC0003DMT400097535 Potato mitochondrion 35.25 59.77
PGSC0003DMT400084902 Potato cytosol 34.24 57.39
PGSC0003DMT400092576 Potato cytosol 30.17 56.69
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 42.03 55.86
PGSC0003DMT400091323 Potato cytosol 27.46 55.1
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 24.75 54.89
PGSC0003DMT400088950 Potato cytosol 38.64 53.52
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 30.17 52.98
PGSC0003DMT400097110 Potato cytosol 29.15 52.44
PGSC0003DMT400096405 Potato cytosol 29.15 51.81
PGSC0003DMT400088552 Potato cytosol 31.53 50.27
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 29.15 48.04
PGSC0003DMT400088770 Potato cytosol 25.08 47.44
PGSC0003DMT400091399 Potato cytosol 22.37 46.15
PGSC0003DMT400086959 Potato cytosol 12.54 45.68
PGSC0003DMT400088899 Potato cytosol 33.9 45.05
PGSC0003DMT400089640 Potato mitochondrion 38.98 44.57
PGSC0003DMT400086264 Potato cytosol 41.02 43.06
PGSC0003DMT400090073 Potato cytosol 34.92 42.39
PGSC0003DMT400087535 Potato cytosol 38.64 41.91
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 27.8 41.62
PGSC0003DMT400085031 Potato cytosol 17.97 40.46
PGSC0003DMT400092830 Potato cytosol 21.02 38.99
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 22.37 38.15
PGSC0003DMT400090908 Potato cytosol 29.15 37.72
PGSC0003DMT400089330 Potato cytosol 34.92 36.27
PGSC0003DMT400087380 Potato cytosol 20.34 35.71
PGSC0003DMT400090406 Potato cytosol 38.98 35.49
PGSC0003DMT400090493 Potato cytosol 42.37 33.88
PGSC0003DMT400088851 Potato cytosol 27.12 33.47
PGSC0003DMT400093361 Potato cytosol 52.2 32.98
PGSC0003DMT400093701 Potato cytosol 27.8 32.93
PGSC0003DMT400085022 Potato cytosol 30.51 32.85
PGSC0003DMT400085014 Potato cytosol 24.75 32.59
PGSC0003DMT400085869 Potato cytosol 38.31 32.01
PGSC0003DMT400091271 Potato cytosol 13.22 30.95
PGSC0003DMT400086337 Potato cytosol 28.47 28.38
PGSC0003DMT400087085 Potato cytosol 27.46 27.18
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 23.73 27.13
PGSC0003DMT400088320 Potato cytosol 12.54 27.01
PGSC0003DMT400093491 Potato cytosol 22.37 26.94
PGSC0003DMT400095385 Potato cytosol 37.29 26.7
PGSC0003DMT400097346 Potato cytosol 11.86 26.12
PGSC0003DMT400026622 Potato cytosol 28.47 25.38
TraesCS5A01G181100.1 Wheat mitochondrion 24.41 24.66
PGSC0003DMT400087595 Potato cytosol 11.53 24.64
PGSC0003DMT400093314 Potato cytosol 26.44 24.61
PGSC0003DMT400086310 Potato cytosol 10.17 24.59
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 24.41 24.57
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 24.41 24.57
PGSC0003DMT400095880 Potato cytosol 10.85 24.06
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 25.42 23.36
KRH46921 Soybean cytosol 23.05 23.21
KRH01762 Soybean extracellular, golgi, vacuole 26.1 23.12
TraesCS5D01G185500.1 Wheat plastid 25.08 23.05
PGSC0003DMT400090690 Potato cytosol 10.85 23.02
PGSC0003DMT400002509 Potato mitochondrion 24.75 22.88
PGSC0003DMT400091817 Potato cytosol 11.53 22.37
HORVU5Hr1G110100.1 Barley mitochondrion 22.71 22.19
PGSC0003DMT400083203 Potato cytosol 24.75 22.12
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 24.07 21.78
TraesCS1B01G323900.1 Wheat plastid 20.0 21.07
Os03t0356900-01 Rice extracellular 22.71 20.62
Os05t0311801-00 Rice cytosol 23.73 20.53
Zm00001d034584_P001 Maize plastid 22.71 20.36
OQU90772 Sorghum plastid 23.39 20.29
Zm00001d003869_P001 Maize cytosol 22.03 20.19
Zm00001d040810_P001 Maize cytosol 24.07 20.17
PGSC0003DMT400015411 Potato cytosol 18.98 20.14
HORVU3Hr1G025950.1 Barley cytosol 23.39 19.94
Os03t0358900-00 Rice cytosol 22.03 19.82
TraesCS5A01G460000.1 Wheat plastid 23.39 19.66
TraesCS5B01G469600.1 Wheat cytosol 23.39 19.66
Zm00001d013021_P001 Maize plastid 22.37 19.58
PGSC0003DMT400037749 Potato cytosol 18.64 19.43
TraesCS3D01G137000.1 Wheat cytosol, plastid 23.05 19.43
EES12063 Sorghum cytosol 22.37 19.41
TraesCS5D01G471100.1 Wheat cytosol 23.05 19.37
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 22.71 19.36
Zm00001d005239_P001 Maize plastid 22.71 19.31
EES02950 Sorghum cytosol 24.07 19.29
EER96067 Sorghum plastid 23.39 19.06
PGSC0003DMT400068836 Potato cytosol 12.88 19.0
TraesCS1A01G057000.1 Wheat cytosol 25.08 18.97
TraesCS3A01G136200.1 Wheat mitochondrion 22.03 18.79
Os03t0810100-01 Rice extracellular 22.71 18.77
PGSC0003DMT400068271 Potato cytosol 23.73 18.47
Zm00001d019171_P001 Maize plastid 22.37 18.13
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 24.07 18.11
Os07t0211700-00 Rice plastid 20.68 17.58
PGSC0003DMT400094882 Potato cytosol 12.2 16.0
PGSC0003DMT400096448 Potato cytosol 4.41 12.5
PGSC0003DMT400096524 Potato cytosol, nucleus 38.64 10.26
PGSC0003DMT400039795 Potato mitochondrion 14.58 9.56
PGSC0003DMT400095744 Potato cytosol 5.76 9.44
PGSC0003DMT400090318 Potato cytosol 3.05 8.65
PGSC0003DMT400096037 Potato cytosol 2.03 5.94
Protein Annotations
EnsemblPlants:PGSC0003DMT400088765EnsemblPlantsGene:PGSC0003DMG400038336Gene3D:1.10.287.890Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75
ncoils:CoilPANTHER:PTHR11088PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400038336SEG:seg
SUPFAM:SSF52540UniParc:UPI0002952C76UniProt:M1DGN8MapMan:50.2.5::
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400038336]
Coordinates
chr00:-:26442267..26445648
Molecular Weight (calculated)
33991.2 Da
IEP (calculated)
8.113
GRAVY (calculated)
-0.335
Length
295 amino acids
Sequence
(BLAST)
001: MVATGTGKSH LSVDLATHFR GEIFQTRDKK CKVYKGDLKI VTNKITHAEK QGVRHYLLGE IEPDSNFMAE DFCLKYIVYI ENFLKTQCVP IIVAGSNSYI
101: EKLVEDPVFM FKYKYDSCFI WIDVEQSVLN RRVDTRVDEM VNEAKMNTFI NNNNKFNKKK VVFIMGATGT GKSRLSVDLA THFRGEIINS DKMQVYRGLE
201: IVTNKITHAE KQGVGHYLLG EIEPDSNFTA EDFCLKCIVY IEMFLKTQGL VDEVPQIFIP DADYTKGIRR SIGSPEMAKY LREEKNIKEM MNQRR
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.