Factsheet for Solyc11g019850.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 3
cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g063730.1.1	Tomato	cytosol	72.22	79.59
Solyc11g061800.1.1	Tomato	cytosol	70.37	76.0
Solyc11g063470.1.1	Tomato	cytosol	72.22	72.22
Solyc11g061780.1.1	Tomato	cytosol	70.37	69.09
Solyc08g061790.1.1	Tomato	cytosol	74.07	64.52
Solyc11g027990.1.1	Tomato	cytosol	70.37	64.41
Solyc11g019900.1.1	Tomato	cytosol	68.52	62.71
Solyc11g020400.1.1	Tomato	cytosol	87.04	41.59
Solyc11g019880.1.1	Tomato	cytosol	88.89	39.67
Solyc11g061860.1.1	Tomato	cytosol	87.04	33.81
PGSC0003DMT400088039	Potato	cytosol	79.63	30.5
Solyc11g061900.1.1	Tomato	cytosol	85.19	23.35
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	77.78	23.33
Solyc11g063740.1.1	Tomato	cytosol	85.19	22.55
Solyc11g061870.1.1	Tomato	cytosol	85.19	22.55
Solyc11g019890.1.1	Tomato	cytosol	85.19	22.44
Solyc11g020380.1.1	Tomato	cytosol	81.48	22.22
Solyc11g063710.1.1	Tomato	cytosol	83.33	22.06
Solyc11g061830.1.1	Tomato	cytosol	81.48	21.57
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	77.78	20.49
Solyc08g061690.1.1	Tomato	cytosol	74.07	20.2
PGSC0003DMT400088765	Potato	cytosol	90.74	16.61
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	90.74	16.12
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	64.81	13.57
Solyc11g063690.1.1	Tomato	cytosol	37.04	12.58
HORVU5Hr1G110100.1	Barley	mitochondrion	64.81	11.59
Solyc09g064910.1.1	Tomato	mitochondrion	66.67	11.46
Solyc05g009410.1.1	Tomato	cytosol	59.26	11.31
TraesCS1B01G323900.1	Wheat	plastid	53.7	10.36
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	62.96	10.33
TraesCS5A01G181100.1	Wheat	mitochondrion	55.56	10.27
TraesCS5A01G460000.1	Wheat	plastid	66.67	10.26
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	55.56	10.24
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	55.56	10.24
HORVU3Hr1G025950.1	Barley	cytosol	64.81	10.12
Zm00001d005239_P001	Maize	plastid	64.81	10.09
Os03t0810100-01	Rice	extracellular	66.67	10.08
Zm00001d034584_P001	Maize	plastid	61.11	10.03
OQU90772	Sorghum	plastid	62.96	10.0
TraesCS5D01G471100.1	Wheat	cytosol	64.81	9.97
TraesCS5B01G469600.1	Wheat	cytosol	64.81	9.97
EER96067	Sorghum	plastid	66.67	9.94
Os05t0311801-00	Rice	cytosol	61.11	9.68
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	57.41	9.66
KRH46921	Soybean	cytosol	51.85	9.56
Solyc04g007240.1.1	Tomato	plastid	57.41	9.54
TraesCS3A01G136200.1	Wheat	mitochondrion	61.11	9.54
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	57.41	9.51
Zm00001d013021_P001	Maize	plastid	59.26	9.5
TraesCS3D01G137000.1	Wheat	cytosol, plastid	61.11	9.43
Zm00001d040810_P001	Maize	cytosol	61.11	9.38
TraesCS5D01G185500.1	Wheat	plastid	55.56	9.35
Zm00001d019171_P001	Maize	plastid	62.96	9.34
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	59.26	9.25
EES02950	Sorghum	cytosol	62.96	9.24
Os03t0356900-01	Rice	extracellular	55.56	9.23
KRH01762	Soybean	extracellular, golgi, vacuole	55.56	9.01
Zm00001d003869_P001	Maize	cytosol	51.85	8.7
Os07t0211700-00	Rice	plastid	55.56	8.65
EES12063	Sorghum	cytosol	51.85	8.24
Os03t0358900-00	Rice	cytosol	50.0	8.23
TraesCS1A01G057000.1	Wheat	cytosol	55.56	7.69
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	55.56	7.65
Solyc11g066960.1.1	Tomato	cytosol	59.26	6.85
Solyc12g014190.1.1	Tomato	mitochondrion	42.59	5.12
Solyc11g061890.1.1	Tomato	cytosol	11.11	4.84

Protein Annotations

KEGG:00908+2.5.1.27	Gene3D:3.40.50.300	MapMan:50.2.5	GO:GO:0003674	GO:GO:0003824	GO:GO:0004161
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0006400	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0052381	UniProt:K4D6T8	PFAM:PF01745	PANTHER:PTHR11088	EnsemblPlantsGene:Solyc11g019850.1	EnsemblPlants:Solyc11g019850.1.1
InterPro:Tzs	UniParc:UPI000276AA82	:	:	:	:

Description

No Description!

Coordinates

chr11:+:9693203..9693941

Molecular Weight (calculated)

5933.2 Da

IEP (calculated)

9.165

GRAVY (calculated)

-0.233

Length

54 amino acids

Sequence
(BLAST)

1: MGATGTGKSR LFVDIATHFR GEIINSDKMQ VYKGLEIVSN KITHAEKQGL VNEV

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.