Factsheet for Solyc11g061870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g061860.1.1	Tomato	cytosol	65.2	95.68
Solyc11g061900.1.1	Tomato	cytosol	91.18	94.42
Solyc11g061830.1.1	Tomato	cytosol	92.65	92.65
Solyc11g063710.1.1	Tomato	cytosol	92.16	92.16
Solyc11g063740.1.1	Tomato	cytosol	91.18	91.18
Solyc11g019880.1.1	Tomato	cytosol	53.92	90.91
Solyc11g063690.1.1	Tomato	cytosol	70.59	90.57
Solyc11g063730.1.1	Tomato	cytosol	21.57	89.8
Solyc11g020380.1.1	Tomato	cytosol	86.27	88.89
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	78.43	88.89
Solyc11g020400.1.1	Tomato	cytosol	49.02	88.5
Solyc11g019890.1.1	Tomato	cytosol	88.73	88.29
Solyc11g061800.1.1	Tomato	cytosol	21.08	86.0
Solyc11g019850.1.1	Tomato	cytosol	22.55	85.19
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	85.29	84.88
Solyc08g061790.1.1	Tomato	cytosol	24.51	80.65
Solyc11g027990.1.1	Tomato	cytosol	22.55	77.97
Solyc11g063470.1.1	Tomato	cytosol	20.59	77.78
Solyc11g061780.1.1	Tomato	cytosol	20.59	76.36
Solyc11g019900.1.1	Tomato	cytosol	22.06	76.27
Solyc08g061690.1.1	Tomato	cytosol	71.08	73.23
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	83.33	55.92
Solyc11g061890.1.1	Tomato	cytosol	25.49	41.94
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	41.18	32.56
Solyc09g064910.1.1	Tomato	mitochondrion	47.55	30.89
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	43.14	30.03
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	43.14	30.03
HORVU5Hr1G110100.1	Barley	mitochondrion	44.12	29.8
TraesCS5A01G181100.1	Wheat	mitochondrion	42.65	29.79
KRH46921	Soybean	cytosol	42.16	29.35
KRH01762	Soybean	extracellular, golgi, vacuole	46.08	28.23
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	45.1	27.96
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	43.14	27.41
TraesCS5D01G185500.1	Wheat	plastid	42.65	27.1
Solyc05g009410.1.1	Tomato	cytosol	37.25	26.86
Zm00001d034584_P001	Maize	plastid	43.14	26.75
EER96067	Sorghum	plastid	47.06	26.52
Zm00001d005239_P001	Maize	plastid	45.1	26.51
TraesCS5A01G460000.1	Wheat	plastid	45.59	26.5
OQU90772	Sorghum	plastid	44.12	26.47
Os05t0311801-00	Rice	cytosol	43.63	26.1
TraesCS5B01G469600.1	Wheat	cytosol	44.61	25.93
TraesCS5D01G471100.1	Wheat	cytosol	44.61	25.93
Zm00001d040810_P001	Maize	cytosol	44.61	25.85
Zm00001d013021_P001	Maize	plastid	42.65	25.82
HORVU3Hr1G025950.1	Barley	cytosol	43.63	25.72
Os03t0358900-00	Rice	cytosol	41.18	25.61
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	40.69	25.46
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	43.14	25.43
EES02950	Sorghum	cytosol	45.59	25.27
Os03t0810100-01	Rice	extracellular	44.12	25.21
Zm00001d019171_P001	Maize	plastid	44.61	25.0
Os03t0356900-01	Rice	extracellular	39.71	24.92
TraesCS3D01G137000.1	Wheat	cytosol, plastid	42.65	24.86
TraesCS3A01G136200.1	Wheat	mitochondrion	41.67	24.57
Zm00001d003869_P001	Maize	cytosol	38.73	24.53
EES12063	Sorghum	cytosol	39.22	23.53
Os07t0211700-00	Rice	plastid	39.71	23.34
Solyc04g007240.1.1	Tomato	plastid	36.76	23.08
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	42.16	21.94
TraesCS1A01G057000.1	Wheat	cytosol	41.67	21.79
TraesCS1B01G323900.1	Wheat	plastid	26.47	19.29
Solyc11g066960.1.1	Tomato	cytosol	41.67	18.2
Solyc12g014190.1.1	Tomato	mitochondrion	24.51	11.14

Protein Annotations

KEGG:00908+2.5.1.27	Gene3D:1.10.287.890	Gene3D:3.40.50.300	MapMan:50.2.5	GO:GO:0003674	GO:GO:0003824
GO:GO:0004161	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0006400	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0052381	UniProt:K4D8Z9	InterPro:P-loop_NTPase	PFAM:PF01745	PANTHER:PTHR11088
PANTHER:PTHR11088:SF49	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc11g061870.1	EnsemblPlants:Solyc11g061870.1.1	InterPro:Tzs	UniParc:UPI00027693B9

Description

No Description!

Coordinates

chr11:+:48583134..48584307

Molecular Weight (calculated)

23719.7 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.383

Length

204 amino acids

Sequence
(BLAST)

001: MNTFINNEEF KKKVIFIMGA TGTGKSHLSV DLATHFRGEI INSDKMQVYK GLEIVTNKMT HTEKQGVRHY LLGLVDEVRQ IFIPDADYTK GIRRSIGVPE
101: MDRYLREETN IDGDDESKKM ILQASISSIK HNTRMLICNQ LDKIQRLISE KMWSFHHIIA TDVFKDDREE DLDEAWTNIV LLPCLDIVKR FLKNDHHNII
201: IECT

Best Arabidopsis Sequence Match ( AT5G19040.1 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.