Factsheet for Solyc05g009410.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037749	Potato	cytosol	92.23	92.23
Solyc11g061800.1.1	Tomato	cytosol	12.01	68.0
Solyc11g063730.1.1	Tomato	cytosol	11.66	67.35
Solyc11g027990.1.1	Tomato	cytosol	13.78	66.1
Solyc08g061790.1.1	Tomato	cytosol	13.07	59.68
Solyc11g019900.1.1	Tomato	cytosol	12.37	59.32
Solyc11g019850.1.1	Tomato	cytosol	11.31	59.26
Solyc11g061780.1.1	Tomato	cytosol	10.95	56.36
Solyc11g063470.1.1	Tomato	cytosol	10.6	55.56
Solyc04g007240.1.1	Tomato	plastid	61.48	53.54
GSMUA_Achr1P12830_001	Banana	cytosol	22.26	52.07
GSMUA_Achr2P06730_001	Banana	cytosol	18.73	50.96
KRH35941	Soybean	cytosol	53.71	50.0
GSMUA_Achr3P29480_001	Banana	cytosol	42.05	45.59
KRG90838	Soybean	mitochondrion	37.1	45.45
Solyc11g019880.1.1	Tomato	cytosol	19.08	44.63
CDY04228	Canola	plastid	50.18	44.51
VIT_01s0011g03640.t01	Wine grape	plastid	51.59	44.24
GSMUA_Achr1P23110_001	Banana	cytosol	48.06	44.01
CDY07385	Canola	plastid	49.47	43.75
CDY44896	Canola	plastid	51.59	43.58
CDY22984	Canola	plastid	46.64	43.0
Solyc11g020400.1.1	Tomato	cytosol	16.96	42.48
CDX81518	Canola	plastid	51.94	42.24
Bra004037.1-P	Field mustard	plastid	49.47	42.04
CDY18571	Canola	plastid	48.06	41.98
CDX95461	Canola	plastid	48.06	41.98
Bra037537.1-P	Field mustard	plastid	48.06	41.98
Solyc11g061860.1.1	Tomato	cytosol	20.49	41.73
CDX82308	Canola	plastid	47.35	41.1
Bra033933.1-P	Field mustard	plastid	52.65	40.93
AT3G19160.1	Thale cress	plastid	47.7	40.91
GSMUA_Achr4P06810_001	Banana	cytosol	44.17	40.85
Bra001737.1-P	Field mustard	plastid	46.64	40.37
Solyc09g064910.1.1	Tomato	mitochondrion	44.17	39.81
AT4G24650.1	Thale cress	cytosol	44.52	39.62
AT1G68460.1	Thale cress	plastid	48.41	38.38
Solyc11g061870.1.1	Tomato	cytosol	26.86	37.25
Os07t0190150-00	Rice	cytosol	30.74	37.02
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	23.32	36.67
AT1G25410.1	Thale cress	plastid	44.17	36.55
Solyc11g063740.1.1	Tomato	cytosol	25.8	35.78
Solyc11g063710.1.1	Tomato	cytosol	25.8	35.78
Solyc11g019890.1.1	Tomato	cytosol	25.8	35.61
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	25.8	35.61
Solyc11g061830.1.1	Tomato	cytosol	25.44	35.29
Os01t0688300-00	Rice	mitochondrion	41.7	35.12
Solyc11g061900.1.1	Tomato	cytosol	24.03	34.52
Solyc11g020380.1.1	Tomato	cytosol	24.03	34.34
Solyc11g061890.1.1	Tomato	cytosol	14.84	33.87
Solyc08g061690.1.1	Tomato	cytosol	23.32	33.33
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	38.52	33.13
Solyc11g063690.1.1	Tomato	cytosol	18.37	32.7
HORVU0Hr1G006770.3	Barley	cytosol	31.8	32.37
Zm00001d011618_P001	Maize	plastid	39.58	32.18
TraesCS1B01G396700.1	Wheat	plastid	39.22	32.08
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	41.34	31.71
Os05t0551700-01	Rice	mitochondrion	40.28	31.67
TraesCS3B01G296500.1	Wheat	plastid	39.93	31.04
TraesCS3D01G263000.1	Wheat	plastid	40.28	30.89
Zm00001d043812_P001	Maize	plastid	38.52	30.79
Zm00001d038921_P001	Maize	mitochondrion, plastid	39.93	30.62
KXG33157	Sorghum	mitochondrion, plastid	39.93	30.21
GSMUA_Achr9P21400_001	Banana	cytosol	29.33	29.96
KXG22495	Sorghum	mitochondrion	40.64	29.56
HORVU1Hr1G083530.2	Barley	plastid	38.52	29.07
TraesCS1D01G383600.1	Wheat	plastid	39.22	28.32
TraesCS1A01G376300.1	Wheat	plastid	38.87	27.99
Solyc11g066960.1.1	Tomato	cytosol	37.81	22.91
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	24.03	22.37
Solyc12g014190.1.1	Tomato	mitochondrion	22.61	14.25

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	GO:GO:0052381	InterPro:IPT	UniProt:K4BXB5	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF51	EnsemblPlantsGene:Solyc05g009410.1	EnsemblPlants:Solyc05g009410.1.1	UniParc:UPI0002766A69	SEG:seg	:

Description

No Description!

Coordinates

chr5:+:3566128..3566979

Molecular Weight (calculated)

32184.8 Da

IEP (calculated)

7.872

GRAVY (calculated)

-0.353

Length

283 amino acids

Sequence
(BLAST)

001: MGATGSGKSK LSIDLATRGF NSEIINSDKI QVSKGLDITT NKISINEQSG VVHHLLGEFS GPELFSPSDF RHTADNRITD IINRRRLPLI VGGSNSFIYA
101: LLSNQFNPGV DVFDEINPVQ CISKELRYHC CFILVDVLTP VLNRYLFQRV DEMMNSGMYE ELEEFFAKNG FSDRNTGIRK AIGVPEMEGY FRNLKNCTTV
201: QEKCRLYEAA LREIKENTKE LAEKQIRKIQ RLRESGWDLQ KVDATEALRA KMTPGNSKIP ATEIWERQVV LPSMKIVKQF LLE

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.