Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P12830_001 | Banana | cytosol | 20.44 | 53.72 |
| KRH35941 | Soybean | cytosol | 46.54 | 48.68 |
| AT3G19160.1 | Thale cress | plastid | 50.0 | 48.18 |
| AT1G68460.1 | Thale cress | plastid | 53.14 | 47.34 |
| GSMUA_Achr2P06730_001 | Banana | cytosol | 15.09 | 46.15 |
| PGSC0003DMT400015411 | Potato | cytosol | 39.94 | 45.68 |
| KRG90838 | Soybean | mitochondrion | 32.7 | 45.02 |
| VIT_01s0011g03640.t01 | Wine grape | plastid | 46.54 | 44.85 |
| Solyc05g009410.1.1 | Tomato | cytosol | 39.62 | 44.52 |
| PGSC0003DMT400037749 | Potato | cytosol | 39.62 | 44.52 |
| AT1G25410.1 | Thale cress | plastid | 44.65 | 41.52 |
| GSMUA_Achr1P23110_001 | Banana | cytosol | 38.99 | 40.13 |
| Solyc04g007240.1.1 | Tomato | plastid | 40.88 | 40.0 |
| GSMUA_Achr4P06810_001 | Banana | cytosol | 37.74 | 39.22 |
| GSMUA_Achr3P29480_001 | Banana | cytosol | 31.76 | 38.7 |
| AT3G63110.1 | Thale cress | plastid | 39.62 | 37.5 |
| Os07t0190150-00 | Rice | cytosol | 27.36 | 37.02 |
| Os01t0688300-00 | Rice | mitochondrion | 38.36 | 36.31 |
| AT3G23630.1 | Thale cress | mitochondrion, plastid | 35.85 | 34.65 |
| Zm00001d011618_P001 | Maize | plastid | 37.11 | 33.91 |
| Os05t0551700-01 | Rice | mitochondrion | 38.05 | 33.61 |
| AT5G19040.1 | Thale cress | mitochondrion | 34.59 | 33.33 |
| TraesCS1B01G396700.1 | Wheat | plastid | 35.85 | 32.95 |
| TraesCS3D01G263000.1 | Wheat | plastid | 37.11 | 31.98 |
| Zm00001d038921_P001 | Maize | mitochondrion, plastid | 37.11 | 31.98 |
| HORVU1Hr1G083530.2 | Barley | plastid | 37.11 | 31.47 |
| Zm00001d043812_P001 | Maize | plastid | 34.91 | 31.36 |
| TraesCS3B01G296500.1 | Wheat | plastid | 35.85 | 31.32 |
| KXG33157 | Sorghum | mitochondrion, plastid | 36.79 | 31.28 |
| TraesCS3A01G263300.1 | Wheat | mitochondrion, plastid | 36.16 | 31.17 |
| HORVU0Hr1G006770.3 | Barley | cytosol | 27.04 | 30.94 |
| TraesCS1D01G383600.1 | Wheat | plastid | 37.74 | 30.61 |
| KXG22495 | Sorghum | mitochondrion | 36.79 | 30.08 |
| GSMUA_Achr9P21400_001 | Banana | cytosol | 26.1 | 29.96 |
| TraesCS1A01G376300.1 | Wheat | plastid | 36.79 | 29.77 |
| AT2G27760.1 | Thale cress | cytosol | 32.39 | 22.1 |
| AT5G20040.3 | Thale cress | mitochondrion | 19.18 | 13.01 |
Protein Annotations
| KEGG:00908+2.5.1.75 | Gene3D:1.10.287.890 | MapMan:11.4.1.1 | Gene3D:3.40.50.300 | EntrezGene:828567 | EMBL:AB061402 |
| EMBL:AB062611 | ProteinID:AEE84938.1 | ArrayExpress:AT4G24650 | EnsemblPlantsGene:AT4G24650 | RefSeq:AT4G24650 | TAIR:AT4G24650 |
| RefSeq:AT4G24650-TAIR-G | EnsemblPlants:AT4G24650.1 | TAIR:AT4G24650.1 | Symbol:ATIPT4 | Unigene:At.2544 | ProteinID:CAA22998.1 |
| ProteinID:CAB79375.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005829 |
| GO:GO:0006139 | GO:GO:0006400 | GO:GO:0008033 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009691 | GO:GO:0009824 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0052381 | GO:GO:0052622 |
| GO:GO:0052623 | InterPro:IPT | HAMAP:MF_00185 | RefSeq:NP_194196.1 | InterPro:P-loop_NTPase | PFAM:PF01715 |
| PO:PO:0009089 | PANTHER:PTHR11088 | PANTHER:PTHR11088:SF51 | UniProt:Q9SB60 | SUPFAM:SSF52540 | UniParc:UPI00000489DA |
| SEG:seg | : | : | : | : | : |
Description
IPT4Adenylate isopentenyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB60]
Coordinates
chr4:+:12720394..12721443
Molecular Weight (calculated)
36676.2 Da
IEP (calculated)
7.527
GRAVY (calculated)
-0.417
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MKCNDKMVVI MGATGSGKSS LSVDLALHFK AEIINSDKMQ FYDGLKITTN QSTIEDRRGV PHHLLGELNP EAGEVTAAEF RVMAAEAISE ITQRKKLPIL
101: AGGSNSYIHA LLAKSYDPEN YPFSDHKGSI CSELKYDCCF IWIDVDQSVL FEYLSLRLDL MMKSGMFEEI AEFHRSKKAP KEPLGIWKAI GVQEFDDYLK
201: MYKWDNDMDK WDPMRKEAYE KAVRAIKENT FQLTKDQITK INKLRNAGWD IKKVDATASF REAIRAAKEG EGVAEMQRKI WNKEVLEPCV KIVRSHLDQP
301: INYYYYYFYL LKRFLSLN
101: AGGSNSYIHA LLAKSYDPEN YPFSDHKGSI CSELKYDCCF IWIDVDQSVL FEYLSLRLDL MMKSGMFEEI AEFHRSKKAP KEPLGIWKAI GVQEFDDYLK
201: MYKWDNDMDK WDPMRKEAYE KAVRAIKENT FQLTKDQITK INKLRNAGWD IKKVDATASF REAIRAAKEG EGVAEMQRKI WNKEVLEPCV KIVRSHLDQP
301: INYYYYYFYL LKRFLSLN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.