CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90838	Soybean	mitochondrion	63.82	83.98
GSMUA_Achr2P06730_001	Banana	cytosol	19.41	56.73
VIT_01s0011g03640.t01	Wine grape	plastid	61.51	56.67
GSMUA_Achr1P12830_001	Banana	cytosol	21.38	53.72
Solyc05g009410.1.1	Tomato	cytosol	50.0	53.71
PGSC0003DMT400037749	Potato	cytosol	49.34	53.0
PGSC0003DMT400015411	Potato	cytosol	47.37	51.8
CDY07385	Canola	plastid	53.62	50.94
Bra004037.1-P	Field mustard	plastid	54.93	50.15
CDY04228	Canola	plastid	51.97	49.53
CDY22984	Canola	plastid	50.0	49.51
CDY44896	Canola	plastid	54.28	49.25
Bra037537.1-P	Field mustard	plastid	52.3	49.07
CDX95461	Canola	plastid	52.3	49.07
CDY18571	Canola	plastid	52.3	49.07
CDX81518	Canola	plastid	55.59	48.56
AT1G68460.1	Thale cress	plastid	55.92	47.62
CDX82308	Canola	plastid	50.99	47.55
GSMUA_Achr3P29480_001	Banana	cytosol	40.46	47.13
Bra001737.1-P	Field mustard	plastid	50.66	47.09
Bra033933.1-P	Field mustard	plastid	55.92	46.7
AT3G19160.1	Thale cress	plastid	50.66	46.67
AT4G24650.1	Thale cress	cytosol	48.68	46.54
Solyc04g007240.1.1	Tomato	plastid	49.67	46.46
GSMUA_Achr1P23110_001	Banana	cytosol	45.39	44.66
AT1G25410.1	Thale cress	plastid	49.01	43.57
GSMUA_Achr4P06810_001	Banana	cytosol	43.75	43.46
KRH67172	Soybean	plastid	44.08	43.37
KRG95498	Soybean	mitochondrion	43.09	42.26
Os07t0190150-00	Rice	cytosol	32.57	42.13
KRH71448	Soybean	golgi, mitochondrion, plastid	45.07	41.9
KRH31999	Soybean	mitochondrion	46.71	41.28
KRH02126	Soybean	plastid	44.41	39.71
KRH51017	Soybean	plastid	43.75	39.58
KRH46921	Soybean	cytosol	37.5	38.91
KRH11376	Soybean	extracellular	43.75	38.89
KRH01762	Soybean	extracellular, golgi, vacuole	42.11	38.44
Os01t0688300-00	Rice	mitochondrion	41.12	37.2
Zm00001d011618_P001	Maize	plastid	40.46	35.34
TraesCS1B01G396700.1	Wheat	plastid	40.13	35.26
TraesCS3B01G296500.1	Wheat	plastid	41.78	34.89
TraesCS3D01G263000.1	Wheat	plastid	41.78	34.42
HORVU0Hr1G006770.3	Barley	cytosol	31.25	34.17
Os05t0551700-01	Rice	mitochondrion	40.46	34.17
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	41.45	34.15
Zm00001d043812_P001	Maize	plastid	39.47	33.9
Zm00001d038921_P001	Maize	mitochondrion, plastid	40.46	33.33
KRH20915	Soybean	cytosol	16.78	33.12
HORVU1Hr1G083530.2	Barley	plastid	40.79	33.07
KXG33157	Sorghum	mitochondrion, plastid	40.46	32.89
TraesCS1D01G383600.1	Wheat	plastid	41.12	31.89
GSMUA_Achr9P21400_001	Banana	cytosol	28.95	31.77
KXG22495	Sorghum	mitochondrion	40.46	31.62
TraesCS1A01G376300.1	Wheat	plastid	40.46	31.3
KRH30498	Soybean	cytosol	39.8	25.31
KRH25178	Soybean	cytosol	24.34	24.58
KRH21996	Soybean	mitochondrion	25.33	17.19

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:ACUP02006712	EnsemblPlantsGene:GLYMA_10G273500
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	UniProt:I1LEW1	InterPro:IPT	EnsemblPlants:KRH35941
ProteinID:KRH35941	ProteinID:KRH35941.1	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF51
MetaCyc:PWY-2781	SUPFAM:SSF52540	UniParc:UPI000233D23C	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:49594484..49595398

Molecular Weight (calculated)

34416.0 Da

IEP (calculated)

7.020

GRAVY (calculated)

-0.392

Length

304 amino acids

Sequence
(BLAST)

001: MDASFHRRKD KVVVIMGATG SGKSRLSIDL ATLFPTSEII NSDKMQVYRG LDITTNKIPT AQRRGVPHHL LGDVDTDHYG EFSPADFRHH AADLIADITR
101: RKNLPIVVGG SNSFVHALLV QNFDPHSHSN VFQQQQEEAL ISSELRYRCC FLWVDIAFPV LSQYLRDRVD DMLDSGMVDE LAQFFDPDAA RRTGFGIRKA
201: IGVPEFDRFF NKYPPSMGQG GDDPLRERAY EEAVKAIKDN TCELAERQIG KIERLKRAGW DLRRIDATEA FRMVLTSGSS NGSGVWERQV LEPSVKIVKR
301: FLME

Best Arabidopsis Sequence Match ( AT1G68460.1 )
(BLAST)

001: MTELNFHLLP IISDRFTTTT TTSPSFSSHS SSSSSLLSFT KRRRKHQPLV SSIRMEQSRS RNRKDKVVVI LGATGAGKSR LSVDLATRFP SEIINSDKIQ
101: VYEGLEITTN QITLQDRRGV PHHLLGVINP EHGELTAGEF RSAASNVVKE ITSRQKVPII AGGSNSFVHA LLAQRFDPKF DPFSSGSCLI SSDLRYECCF
201: IWVDVSETVL YEYLLRRVDE MMDSGMFEEL SRFYDPVKSG LETRFGIRKA IGVPEFDGYF KEYPPEKKMI KWDALRKAAY DKAVDDIKRN TWTLAKRQVK
301: KIEMLKDAGW EIERVDATAS FKAVMMKSSS EKKWRENWEE QVLEPSVKIV KRHLVQN

Arabidopsis Description

IPT1Adenylate isopentenyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.