CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0014g01630.t01	Wine grape	mitochondrion	65.62	74.24
PGSC0003DMT400039795	Potato	mitochondrion	67.63	67.33
Solyc12g014190.1.1	Tomato	mitochondrion	66.52	66.37
CDY45111	Canola	plastid	32.37	65.91
GSMUA_Achr1P06960_001	Banana	cytosol	35.04	63.05
CDX70907	Canola	plastid	63.17	61.12
CDX88863	Canola	plastid	62.95	60.91
Bra006535.1-P	Field mustard	plastid	62.72	60.69
Bra020081.1-P	Field mustard	plastid	62.05	59.91
AT5G20040.3	Thale cress	mitochondrion	61.83	59.06
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	52.68	57.7
KXG36879	Sorghum	mitochondrion	54.46	54.83
TraesCS7A01G560300.1	Wheat	mitochondrion	52.68	52.1
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	52.68	51.98
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	52.01	51.55
HORVU7Hr1G120070.12	Barley	mitochondrion	53.12	48.97
OQU77179	Sorghum	mitochondrion	54.02	47.92
KRH35941	Soybean	cytosol	17.19	25.33
KRH71448	Soybean	golgi, mitochondrion, plastid	17.86	24.46
KRH67172	Soybean	plastid	16.74	24.27
KRG95498	Soybean	mitochondrion	16.52	23.87
KRG90838	Soybean	mitochondrion	12.28	23.81
KRH51017	Soybean	plastid	17.63	23.51
KRH31999	Soybean	mitochondrion	17.63	22.97
KRH02126	Soybean	plastid	16.96	22.35
KRH46921	Soybean	cytosol	14.51	22.18
KRH01762	Soybean	extracellular, golgi, vacuole	16.07	21.62
KRH11376	Soybean	extracellular	16.29	21.34
KRH30498	Soybean	cytosol	17.63	16.53
KRH20915	Soybean	cytosol	4.91	14.29
KRH25178	Soybean	cytosol	8.93	13.29

Protein Annotations

KEGG:00908+2.5.1.75	EntrezGene:100808814	MapMan:50.2.5	EMBL:ACUP02008374	EnsemblPlantsGene:GLYMA_13G271500	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006400	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	GO:GO:0052381	UniProt:I1M325
InterPro:IPT	EnsemblPlants:KRH21996	ProteinID:KRH21996	ProteinID:KRH21996.1	HAMAP:MF_00185	InterPro:P-loop_NTPase
PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF50	MetaCyc:PWY-2781	SUPFAM:SSF52540	TIGRFAMs:TIGR00174
UniParc:UPI000233B7F5	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:37340399..37347149

Molecular Weight (calculated)

51308.7 Da

IEP (calculated)

7.541

GRAVY (calculated)

-0.526

Length

448 amino acids

Sequence
(BLAST)

001: MISNGVCTLR TCLRFPARPL FREPPRLFSC RQRFLVTASE TKKKEKVIVI SGPTGSGKSR LALELAKRLN GEIVSADSVQ VYRGLDVGSA KPSPNERKEV
101: PHHLVDILHP SEDYSVGQFF EDARQATGCI LDNGRVPIVV GGTGLYLRWF IYGKPDVPKA SPEIVSEAYQ ELAELQRNDD WDTAVQLVVK AGDPKAQFLA
201: VNDWYRLRRS LEIIKSSGSP PSAFRVPYDS FREQGEYGVA DGSELSDMNT YGDAMEKTNS SELDYEFMCF FLSSHRLDLY KSIDYRCEDM LLGRDGILSE
301: AQWLLDTGLH PNSNSATKAI GYRQAMEYLQ RCREQGGHSS VEEFYKFLFE FQKASRNFAK RQLTWFRNEN IYQWLDASKP LETILDFIHG AYHDWNGSIL
401: VPEDLRMSRD ISNHRQAAQL KAYRTRNRHF VNGEDCTHIL NWIRKTQR

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.