CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51017	Soybean	plastid	89.12	90.18
KRH11376	Soybean	extracellular	63.82	63.45
KRH20915	Soybean	cytosol	27.94	61.69
VIT_05s0020g02630.t01	Wine grape	cytosol	52.94	54.55
AT5G19040.1	Thale cress	mitochondrion	48.82	50.3
Bra023701.1-P	Field mustard	cytosol	48.24	49.55
CDY47191	Canola	cytosol	48.24	49.55
KRG95498	Soybean	mitochondrion	45.0	49.35
CDY02590	Canola	cytosol	48.24	49.1
Bra002204.1-P	Field mustard	mitochondrion	47.94	48.8
CDX92563	Canola	mitochondrion	47.65	48.5
CDY13945	Canola	mitochondrion	47.65	48.5
KRH67172	Soybean	plastid	43.53	47.9
GSMUA_AchrUn_...	Banana	cytosol	39.41	46.85
KRH71448	Soybean	golgi, mitochondrion, plastid	44.41	46.18
HORVU5Hr1G110100.1	Barley	mitochondrion	40.88	46.03
CDX77492	Canola	plastid	44.41	45.48
AT3G23630.1	Thale cress	mitochondrion, plastid	43.82	45.29
Bra014968.1-P	Field mustard	plastid	44.12	45.18
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	43.24	44.68
CDX85119	Canola	plastid	43.53	44.58
KRH35941	Soybean	cytosol	39.71	44.41
Zm00001d040810_P001	Maize	cytosol	45.59	44.03
PGSC0003DMT400083203	Potato	cytosol	42.65	43.94
KRH31999	Soybean	mitochondrion	43.82	43.31
KRG90838	Soybean	mitochondrion	29.12	42.86
Zm00001d034584_P001	Maize	plastid	41.18	42.55
Bra028326.1-P	Field mustard	plastid	37.65	42.52
OQU90772	Sorghum	plastid	41.47	41.47
Os05t0311801-00	Rice	cytosol	41.18	41.06
Zm00001d013021_P001	Maize	plastid	40.59	40.95
EES02950	Sorghum	cytosol	44.12	40.76
Zm00001d005239_P001	Maize	plastid	41.18	40.35
TraesCS3D01G137000.1	Wheat	cytosol, plastid	41.47	40.29
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	40.88	40.17
TraesCS5A01G460000.1	Wheat	plastid	40.88	39.6
Os03t0810100-01	Rice	extracellular	41.47	39.5
TraesCS5A01G181100.1	Wheat	mitochondrion	33.82	39.38
KRH46921	Soybean	cytosol	33.82	39.25
CDY18104	Canola	cytosol	32.65	39.22
KRH01762	Soybean	extracellular, golgi, vacuole	38.24	39.04
TraesCS5D01G471100.1	Wheat	cytosol	40.29	39.03
HORVU3Hr1G025950.1	Barley	cytosol	39.71	39.02
TraesCS3A01G136200.1	Wheat	mitochondrion	39.71	39.02
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	33.53	38.91
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	33.53	38.91
Os07t0211700-00	Rice	plastid	39.71	38.9
TraesCS5B01G469600.1	Wheat	cytosol	40.0	38.75
Zm00001d019171_P001	Maize	plastid	41.47	38.74
EER96067	Sorghum	plastid	40.88	38.4
Os03t0356900-01	Rice	extracellular	35.88	37.54
Os03t0358900-00	Rice	cytosol	36.18	37.5
Zm00001d003869_P001	Maize	cytosol	33.82	35.71
TraesCS5D01G185500.1	Wheat	plastid	33.24	35.2
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	32.94	34.89
EES12063	Sorghum	cytosol	34.71	34.71
GSMUA_AchrUn_...	Banana	mitochondrion	35.29	34.38
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	32.94	34.36
TraesCS1B01G323900.1	Wheat	plastid	27.06	32.86
TraesCS1A01G057000.1	Wheat	cytosol	35.88	31.28
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	35.29	30.61
KRH30498	Soybean	cytosol	35.88	25.52
KRH25178	Soybean	cytosol	20.29	22.92
KRH21996	Soybean	mitochondrion	22.35	16.96

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	EntrezGene:100778430	MapMan:11.4.1.1	Gene3D:3.40.50.300	UniProt:A0A0R0F723
EMBL:ACUP02010294	EnsemblPlantsGene:GLYMA_17G017400	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	InterPro:IPT	EnsemblPlants:KRH02126	ProteinID:KRH02126	ProteinID:KRH02126.1	InterPro:P-loop_NTPase
PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	MetaCyc:PWY-2781	SUPFAM:SSF52540	UniParc:UPI00015FE45A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:1313758..1315795

Molecular Weight (calculated)

37665.9 Da

IEP (calculated)

7.748

GRAVY (calculated)

-0.215

Length

340 amino acids

Sequence
(BLAST)

001: MNMVSVSAAV CKPVVASFNP ASLRNMDSLS LFRHHRNNKE KVVVIMGATG TGKSKLAIDL ATQFPPAEIV NSDKMQVYEG LDITTNKVTE EERRGVLHHL
101: LGTVNPNTNF TAQDFCDHAT LAVGSILGRD GLPIIAGGSN SFLDALVNHH TEFRLRYECC FLWVDVSLPV LHSSLSARVD RMIHAGQVHE VRKSFQYHND
201: DYTVGLRKAI GVPEFHDFFR AEADGADERT KQRLLEAAIA SLKTNNCSLA NRQVQKIHRL YGMWKRNMHR LDATEVFLKN ATRQEEAEEA WEDHVLSKSR
301: RILNKFLYED THVAPAGIAA SVVIASSPPA MAAAAAAATH

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.