Factsheet for Bra023701.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47191	Canola	cytosol	99.7	99.7
Bra002204.1-P	Field mustard	mitochondrion	89.12	88.32
AT5G19040.1	Thale cress	mitochondrion	86.4	86.67
Bra014968.1-P	Field mustard	plastid	54.98	54.82
VIT_05s0020g02630.t01	Wine grape	cytosol	54.08	54.24
Bra028326.1-P	Field mustard	plastid	46.22	50.83
HORVU5Hr1G110100.1	Barley	mitochondrion	45.62	50.0
KRH11376	Soybean	extracellular	51.66	50.0
GSMUA_AchrUn_...	Banana	cytosol	43.2	50.0
KRH51017	Soybean	plastid	49.24	48.51
KRH02126	Soybean	plastid	49.55	48.24
Bra040431.1-P	Field mustard	mitochondrion, plastid	48.34	47.9
Bra007728.1-P	Field mustard	plastid	47.73	47.59
Zm00001d034584_P001	Maize	plastid	46.22	46.5
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	45.62	45.9
OQU90772	Sorghum	plastid	46.83	45.59
KRH20915	Soybean	cytosol	21.15	45.45
PGSC0003DMT400083203	Potato	cytosol	44.71	44.85
Zm00001d013021_P001	Maize	plastid	45.62	44.81
TraesCS5A01G460000.1	Wheat	plastid	46.53	43.87
Zm00001d040810_P001	Maize	cytosol	46.53	43.75
Os03t0810100-01	Rice	extracellular	47.13	43.7
Zm00001d019171_P001	Maize	plastid	47.73	43.41
EER96067	Sorghum	plastid	47.13	43.09
TraesCS5D01G471100.1	Wheat	cytosol	45.62	43.02
Zm00001d005239_P001	Maize	plastid	45.02	42.94
TraesCS5A01G181100.1	Wheat	mitochondrion	37.76	42.81
TraesCS5B01G469600.1	Wheat	cytosol	45.32	42.73
Os07t0211700-00	Rice	plastid	44.11	42.07
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	37.16	41.98
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	37.16	41.98
Os05t0311801-00	Rice	cytosol	43.2	41.94
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	43.2	41.33
TraesCS3D01G137000.1	Wheat	cytosol, plastid	43.2	40.86
EES02950	Sorghum	cytosol	45.32	40.76
TraesCS3A01G136200.1	Wheat	mitochondrion	42.3	40.46
HORVU3Hr1G025950.1	Barley	cytosol	41.99	40.17
Os03t0358900-00	Rice	cytosol	39.58	39.94
Os03t0356900-01	Rice	extracellular	38.67	39.38
Zm00001d003869_P001	Maize	cytosol	38.07	39.13
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	38.37	38.96
GSMUA_AchrUn_...	Banana	mitochondrion	40.48	38.4
TraesCS5D01G185500.1	Wheat	plastid	37.16	38.32
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	36.86	38.01
EES12063	Sorghum	cytosol	37.76	36.76
Bra037537.1-P	Field mustard	plastid	35.05	35.8
Bra004037.1-P	Field mustard	plastid	35.95	35.74
TraesCS1B01G323900.1	Wheat	plastid	30.21	35.71
Bra001737.1-P	Field mustard	plastid	35.05	35.47
TraesCS1A01G057000.1	Wheat	cytosol	40.18	34.1
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	40.18	33.93
Bra033933.1-P	Field mustard	plastid	37.16	33.79
Bra034366.1-P	Field mustard	cytosol	34.14	24.41
Bra006535.1-P	Field mustard	plastid	22.66	16.2
Bra020081.1-P	Field mustard	plastid	22.36	15.95

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:AB186134	ProteinID:BAE43828
ProteinID:BAE43828.1	EnsemblPlantsGene:Bra023701	EnsemblPlants:Bra023701.1	EnsemblPlants:Bra023701.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
InterPro:IPT	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	UniProt:Q402G8
SUPFAM:SSF52540	UniParc:UPI00005A9B2D	SEG:seg	:	:	:

Description

AT5G19040 (E=1e-156) ATIPT5, IPT5 | IPT5; ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups

Coordinates

chrA02:-:4611002..4611997

Molecular Weight (calculated)

37641.2 Da

IEP (calculated)

5.953

GRAVY (calculated)

-0.230

Length

331 amino acids

Sequence
(BLAST)

001: MKPCMTALRQ TIPPLLNFKE ISTGLNMVDV PYFRRKDKVV FVMGATGTGK SRLAIDLATR FPAEIVNSDK IQVYKGLDIV TNKVTPEESL GVPHHLLGTV
101: EDTHEDFTAE DFQREAIRAV KSIVERDRVP IIAGGSNSYI EALVNNCVDF RLRYNCCFLW VDVDKPVLHS FVSERVDKMV EMGLVDEVRR IFDPTSDDYS
201: TGIRRAIGVP ELDEFLRAEL LNYPTSKLLE TAIKKIKDSN CLLASRQYQK IQRLYKQWKW NMHRLDATEV FLRRGEEADD AWEDKVARPS ALAVDRFLNY
301: SEDHHLEGAD ILLPEISVVP PFPAAVAAIS R

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.