Factsheet for Bra034366.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30532	Canola	cytosol	97.84	97.63
AT2G27760.1	Thale cress	cytosol	78.4	77.9
PGSC0003DMT400068271	Potato	cytosol	47.3	57.78
Solyc11g066960.1.1	Tomato	cytosol	56.37	55.89
VIT_06s0061g01410.t01	Wine grape	nucleus	56.8	55.49
KRH30498	Soybean	cytosol	54.43	52.72
GSMUA_Achr11P...	Banana	cytosol	45.79	50.48
TraesCS2B01G276300.2	Wheat	plastid	48.6	48.28
TraesCS2D01G258000.3	Wheat	plastid	48.16	47.85
TraesCS2A01G265700.1	Wheat	plastid	43.84	46.99
Os01t0968700-01	Rice	cytosol	46.87	46.97
HORVU2Hr1G062320.8	Barley	plastid	48.38	46.96
KRH25178	Soybean	cytosol	30.24	46.51
Zm00001d041982_P001	Maize	plastid	46.87	46.17
EES02135	Sorghum	cytosol, plastid	46.65	46.06
HORVU2Hr1G061960.1	Barley	cytosol	19.44	43.27
HORVU2Hr1G061970.1	Barley	cytosol	19.44	43.27
Bra037537.1-P	Field mustard	plastid	23.97	34.26
Bra023701.1-P	Field mustard	cytosol	24.41	34.14
Bra002204.1-P	Field mustard	mitochondrion	23.97	33.23
Bra014968.1-P	Field mustard	plastid	23.33	32.53
Bra001737.1-P	Field mustard	plastid	22.89	32.42
Bra040431.1-P	Field mustard	mitochondrion, plastid	23.11	32.04
Bra028326.1-P	Field mustard	plastid	20.52	31.56
Bra007728.1-P	Field mustard	plastid	22.25	31.02
Bra004037.1-P	Field mustard	plastid	22.03	30.63
Bra033933.1-P	Field mustard	plastid	23.54	29.95
Bra020081.1-P	Field mustard	plastid	17.93	17.89
Bra006535.1-P	Field mustard	plastid	17.71	17.71

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:1.10.287.890	Gene3D:3.30.160.60	Gene3D:3.40.50.300	MapMan:50.2.5
EnsemblPlantsGene:Bra034366	EnsemblPlants:Bra034366.1	EnsemblPlants:Bra034366.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009824	GO:GO:0009987	GO:GO:0016740	InterPro:IPT	UniProt:M4EZX3
HAMAP:MF_00185	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF26	SUPFAM:SSF52540
TIGRFAMs:TIGR00174	UniParc:UPI0002543A7D	SEG:seg	:	:	:

Description

AT2G27760 (E=1e-192) ATIPT2, IPPT | ATIPT2 (TRNA ISOPENTENYLTRANSFERASE 2); adenylate dimethylallyltransferase/ tRNA isopentenyltransferase

Coordinates

chrA04:+:12162727..12166024

Molecular Weight (calculated)

52449.1 Da

IEP (calculated)

6.246

GRAVY (calculated)

-0.536

Length

463 amino acids

Sequence
(BLAST)

001: MSLNPSNGGI DEAKMKKKAK VVVIMGPTGS GKSKLAVDLA SHFPVEIINA DAMQIYSGLD VLTNKVTVNE QKGVTHHLLG TVSPDLEFTA KDFRDSTIPL
101: IEEILSRNHV PVLVGGTNYY IQALVSKFLL EDSTEDVDEC CSNVAPGLDV ESISGRDDLS HGYDLLKELD PVAANRVHPN NHRKINQYLS LHASRGVLPS
201: KLYQENAAEN WGCIDASSRF DYCLICMDAE TTVLDEYVGQ RVDSMVDAGL LDEVYDIYKP GADYTRGLRQ SIGVREFENF LKTYLPDTNS SANDKALKEN
301: LRKILDSPKD DKLRVMLEEA IDSVKLNTRR LLRRQKRRIN RLETVFGWNI HHVDATECLL GKSEESWDVQ VVKPATQILQ SFLKTETELS HDSTLRKSME
401: RDLWSQYVCE VCGNKVLRGR HEWDHHTQGR VHRKRTARFK KAQNFENREK QEEEEVGICR ETS

Best Arabidopsis Sequence Match ( AT2G27760.1 )
(BLAST)

001: MMMLNPSNGG IEGEKMKKKA KVVVIMGPTG SGKSKLAVDL ASHFPVEIIN ADAMQIYSGL DVLTNKVTVD EQKGVPHHLL GTVSSDMEFT ARDFRDFTVP
101: LIEEIVSRNH IPVLVGGTHY YIQAVVSKFL LDDAAEDTEE CCADVASVVD QDMVVESVFG RDDLSHGYEL LKELDPVAAN RIHPNNHRKI NQYLSLHASR
201: GVLPSKLYQG KTAENWGCIN ASRFDYCLIC MDAETAVLDR YVEQRVDAMV DAGLLDEVYD IYKPGADYTR GLRQSIGVRE FEDFLKIHLS ETCAGHLTSL
301: SNDDKVMKEN LRKILNFPKD DKLRIMLEEA IDRVKLNTRR LLRRQKRRVS RLETVFGWNI HYIDATEYIL SKSEESWNAQ VVKPASEIIR CFLETETESG
401: RDPTSGKSIE RDLWTQYVCE ACGNKILRGR HEWEHHKQGR THRKRTTRHK NSQTYKNREV QEAEVN

Arabidopsis Description

IPT2tRNA dimethylallyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.