Factsheet for Bra037537.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18571	Canola	plastid	100.0	100.0
Bra001737.1-P	Field mustard	plastid	79.01	78.29
AT3G19160.1	Thale cress	plastid	71.91	70.61
Bra004037.1-P	Field mustard	plastid	57.1	55.56
GSMUA_Achr2P06730_001	Banana	cytosol	17.28	53.85
VIT_01s0011g03640.t01	Wine grape	plastid	54.63	53.64
GSMUA_Achr1P12830_001	Banana	cytosol	19.75	52.89
KRH35941	Soybean	cytosol	49.07	52.3
Bra033933.1-P	Field mustard	plastid	57.1	50.82
PGSC0003DMT400015411	Potato	cytosol	43.21	50.36
KRG90838	Soybean	mitochondrion	35.49	49.78
PGSC0003DMT400037749	Potato	cytosol	42.28	48.41
Solyc05g009410.1.1	Tomato	cytosol	41.98	48.06
Solyc04g007240.1.1	Tomato	plastid	44.75	44.62
Bra040431.1-P	Field mustard	mitochondrion, plastid	44.44	43.11
Bra007728.1-P	Field mustard	plastid	43.52	42.47
GSMUA_Achr1P23110_001	Banana	cytosol	38.27	40.13
GSMUA_Achr4P06810_001	Banana	cytosol	37.65	39.87
GSMUA_Achr3P29480_001	Banana	cytosol	32.1	39.85
Os07t0190150-00	Rice	cytosol	27.78	38.3
Bra014968.1-P	Field mustard	plastid	37.96	37.05
Bra023701.1-P	Field mustard	cytosol	35.8	35.05
Os01t0688300-00	Rice	mitochondrion	36.11	34.82
Bra002204.1-P	Field mustard	mitochondrion	35.8	34.73
Bra028326.1-P	Field mustard	plastid	31.79	34.22
Os05t0551700-01	Rice	mitochondrion	36.11	32.5
TraesCS1B01G396700.1	Wheat	plastid	34.57	32.37
Zm00001d011618_P001	Maize	plastid	34.57	32.18
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	36.42	31.98
HORVU0Hr1G006770.3	Barley	cytosol	27.16	31.65
TraesCS3B01G296500.1	Wheat	plastid	35.49	31.59
TraesCS3D01G263000.1	Wheat	plastid	35.8	31.44
HORVU1Hr1G083530.2	Barley	plastid	35.8	30.93
Zm00001d038921_P001	Maize	mitochondrion, plastid	35.19	30.89
Zm00001d043812_P001	Maize	plastid	33.64	30.79
KXG33157	Sorghum	mitochondrion, plastid	35.19	30.48
TraesCS1A01G376300.1	Wheat	plastid	36.42	30.03
KXG22495	Sorghum	mitochondrion	35.8	29.82
TraesCS1D01G383600.1	Wheat	plastid	35.8	29.59
GSMUA_Achr9P21400_001	Banana	cytosol	24.69	28.88
Bra034366.1-P	Field mustard	cytosol	34.26	23.97
Bra006535.1-P	Field mustard	plastid	21.6	15.12
Bra020081.1-P	Field mustard	plastid	21.3	14.87

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EMBL:AB186136	ProteinID:BAE43830
ProteinID:BAE43830.1	EnsemblPlantsGene:Bra037537	EnsemblPlants:Bra037537.1	EnsemblPlants:Bra037537.1-P	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	UniProt:M4F8X5	InterPro:P-loop_NTPase
PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF51	SUPFAM:SSF52540	UniParc:UPI0002544CB1	SEG:seg

Description

AT3G19160 (E=3e-122) ATIPT8, PGA22 | ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES); adenylate dimethylallyltransferase

Coordinates

chrA01:+:21722124..21723845

Molecular Weight (calculated)

36892.3 Da

IEP (calculated)

8.461

GRAVY (calculated)

-0.335

Length

324 amino acids

Sequence
(BLAST)

001: MQALTSFFVS RSLVPTTPRR PRVRPLSVPP MTVCIDQSRN EKVVVIMGST GTGKSRLSVD LATRFSAEII NSDKMQFYKG LEITTNQITI PERCGVPHHL
101: LGELPVDGPE LTASEFRSLA SGFISEMTSR GKLPIIAGGS NSFIHALLVE HFDPETNPFS KTLIPTELRY DCCFLWVDVS VSVLYHYLSK RVDQMMESGM
201: FEELADFYNS RDSRSTTRTG IHKSIGVPEF DRYFGVYPPE KNDKVCGWDP ARKVAYEEAV QEIKENTWRL SKKQIDRIMK LRSSGWEIHR LDATASFRAQ
301: SREVWDKNVL EKSVKIVKRF VLED

Best Arabidopsis Sequence Match ( AT3G19160.1 )
(BLAST)

001: MQNLTSTFVS PSMIPITSPR LRLPPPRSVV PMTTVCMEQS YKQKVVVIMG ATGSGKSCLS IDLATRFSGE IVNSDKIQFY DGLKVTTNQM SILERCGVPH
101: HLLGELPPDD SELTTSEFRS LASRSISEIT ARGNLPIIAG GSNSFIHALL VDRFDPKTYP FSSETSISSG LRYECCFLWV DVSVSVLFEY LSKRVDQMME
201: SGMFEELAGF YDPRYSGSAI RAHGIHKTIG IPEFDRYFSL YPPERKQKMS EWDQARKGAY DEAVQEIKEN TWRLAKKQIE RIMKLKSSGW DIQRLDATPS
301: FGRSSREIWD NTVLDESIKV VKRFLVKDKV

Arabidopsis Description

IPT8Adenylate isopentenyltransferase 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.