Factsheet for GSMUA_Achr1P12830_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P06730_001	Banana	cytosol	44.63	51.92
GSMUA_Achr1P23110_001	Banana	cytosol	85.12	33.33
GSMUA_Achr3P29480_001	Banana	cytosol	64.46	29.89
GSMUA_Achr9P21400_001	Banana	cytosol	66.94	29.24
GSMUA_Achr4P06810_001	Banana	cytosol	69.42	27.45
Os07t0190150-00	Rice	cytosol	45.45	23.4
PGSC0003DMT400015411	Potato	cytosol	51.24	22.3
Solyc05g009410.1.1	Tomato	cytosol	52.07	22.26
PGSC0003DMT400037749	Potato	cytosol	51.24	21.91
VIT_01s0011g03640.t01	Wine grape	plastid	58.68	21.52
CDY22984	Canola	plastid	54.55	21.5
KRH35941	Soybean	cytosol	53.72	21.38
Os01t0688300-00	Rice	mitochondrion	58.68	21.13
AT3G19160.1	Thale cress	plastid	57.02	20.91
Zm00001d011618_P001	Maize	plastid	59.5	20.69
AT4G24650.1	Thale cress	cytosol	53.72	20.44
Zm00001d043812_P001	Maize	plastid	58.68	20.06
CDX82308	Canola	plastid	53.72	19.94
CDY18571	Canola	plastid	52.89	19.75
Bra037537.1-P	Field mustard	plastid	52.89	19.75
TraesCS1B01G396700.1	Wheat	plastid	56.2	19.65
Bra001737.1-P	Field mustard	plastid	52.89	19.57
Zm00001d038921_P001	Maize	mitochondrion, plastid	59.5	19.51
CDX95461	Canola	plastid	52.07	19.44
KXG33157	Sorghum	mitochondrion, plastid	59.5	19.25
Os05t0551700-01	Rice	mitochondrion	57.02	19.17
CDY44896	Canola	plastid	52.89	19.1
Solyc04g007240.1.1	Tomato	plastid	51.24	19.08
CDY07385	Canola	plastid	49.59	18.75
TraesCS3B01G296500.1	Wheat	plastid	56.2	18.68
KRG90838	Soybean	mitochondrion	35.54	18.61
CDY04228	Canola	plastid	48.76	18.5
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	55.37	18.16
TraesCS3D01G263000.1	Wheat	plastid	55.37	18.16
CDX81518	Canola	plastid	52.07	18.1
Bra004037.1-P	Field mustard	plastid	49.59	18.02
HORVU1Hr1G083530.2	Barley	plastid	55.37	17.87
KXG22495	Sorghum	mitochondrion	57.02	17.74
AT1G68460.1	Thale cress	plastid	52.07	17.65
Bra033933.1-P	Field mustard	plastid	52.89	17.58
TraesCS1D01G383600.1	Wheat	plastid	56.2	17.35
TraesCS1A01G376300.1	Wheat	plastid	55.37	17.05
AT1G25410.1	Thale cress	plastid	46.28	16.37
GSMUA_Achr5P07950_001	Banana	cytosol	42.15	15.27
GSMUA_AchrUn_...	Banana	cytosol	33.06	13.99
HORVU0Hr1G006770.3	Barley	cytosol	31.41	13.67
GSMUA_Achr11P...	Banana	cytosol	47.11	13.57
GSMUA_Achr3P09080_001	Banana	extracellular	24.79	8.98
GSMUA_AchrUn_...	Banana	mitochondrion	24.79	8.6
GSMUA_Achr1P06960_001	Banana	cytosol	0.83	0.4

Protein Annotations

EnsemblPlants:GSMUA_Achr1P12830_001	EnsemblPlants:GSMUA_Achr1T12830_001	EnsemblPlantsGene:GSMUA_Achr1G12830_001	Gene3D:3.40.50.300	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	InterPro:P-loop_NTPase	KEGG:00908+2.5.1.75
PANTHER:PTHR11088	PANTHER:PTHR11088:SF51	PFAM:PF01715	SEG:seg	SUPFAM:SSF52540	UniParc:UPI0002947FFA
UniProt:M0RZE1	MapMan:11.4.1.1	:	:	:	:

Description

Adenylate isopentenyltransferase [Source:GMGC_GENE;Acc:GSMUA_Achr1G12830_001]

Coordinates

chr1:+:9851118..9853830

Molecular Weight (calculated)

13129.7 Da

IEP (calculated)

6.810

GRAVY (calculated)

-0.262

Length

121 amino acids

Sequence
(BLAST)

001: MGATGTGKSK LSVDLSVMFS GEVVNSDKIQ VYRGLDITTN KIPVVERRGV PHHLLGELDP AAGELPPVGF RALAERAIGD ISARGRVPVL AGGSNSFIHA
101: LLSDRERERE REREREVILE S

Best Arabidopsis Sequence Match ( AT3G19160.1 )
(BLAST)

001: MQNLTSTFVS PSMIPITSPR LRLPPPRSVV PMTTVCMEQS YKQKVVVIMG ATGSGKSCLS IDLATRFSGE IVNSDKIQFY DGLKVTTNQM SILERCGVPH
101: HLLGELPPDD SELTTSEFRS LASRSISEIT ARGNLPIIAG GSNSFIHALL VDRFDPKTYP FSSETSISSG LRYECCFLWV DVSVSVLFEY LSKRVDQMME
201: SGMFEELAGF YDPRYSGSAI RAHGIHKTIG IPEFDRYFSL YPPERKQKMS EWDQARKGAY DEAVQEIKEN TWRLAKKQIE RIMKLKSSGW DIQRLDATPS
301: FGRSSREIWD NTVLDESIKV VKRFLVKDKV

Arabidopsis Description

IPT8Adenylate isopentenyltransferase 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.