CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22984	Canola	plastid	90.49	96.09
Bra001737.1-P	Field mustard	plastid	96.01	95.72
CDY18571	Canola	plastid	79.45	79.94
CDX95461	Canola	plastid	79.14	79.63
AT3G19160.1	Thale cress	plastid	73.93	73.03
CDY07385	Canola	plastid	53.68	54.69
GSMUA_Achr1P12830_001	Banana	cytosol	19.94	53.72
CDY04228	Canola	plastid	52.15	53.29
GSMUA_Achr2P06730_001	Banana	cytosol	16.87	52.88
VIT_01s0011g03640.t01	Wine grape	plastid	53.37	52.73
CDX81518	Canola	plastid	55.83	52.3
CDY44896	Canola	plastid	53.68	52.24
KRH35941	Soybean	cytosol	47.55	50.99
PGSC0003DMT400015411	Potato	cytosol	41.72	48.92
PGSC0003DMT400037749	Potato	cytosol	41.1	47.35
Solyc05g009410.1.1	Tomato	cytosol	41.1	47.35
KRG90838	Soybean	mitochondrion	33.13	46.75
Solyc04g007240.1.1	Tomato	plastid	44.48	44.62
CDX93935	Canola	plastid	44.17	43.11
CDY67797	Canola	mitochondrion	43.87	43.07
CDY63340	Canola	plastid	43.56	42.77
CDX89173	Canola	mitochondrion, plastid	43.56	42.52
GSMUA_Achr1P23110_001	Banana	cytosol	39.57	41.75
GSMUA_Achr3P29480_001	Banana	cytosol	32.82	41.0
GSMUA_Achr4P06810_001	Banana	cytosol	37.73	40.2
Os07t0190150-00	Rice	cytosol	27.3	37.87
CDY47191	Canola	cytosol	35.89	35.35
CDY02590	Canola	cytosol	36.2	35.33
CDX77492	Canola	plastid	35.89	35.24
CDX85119	Canola	plastid	35.58	34.94
CDX92563	Canola	mitochondrion	34.97	34.13
CDY13945	Canola	mitochondrion	34.97	34.13
Os01t0688300-00	Rice	mitochondrion	34.97	33.93
TraesCS1B01G396700.1	Wheat	plastid	34.97	32.95
Os05t0551700-01	Rice	mitochondrion	35.58	32.22
HORVU1Hr1G083530.2	Barley	plastid	36.5	31.73
Zm00001d038921_P001	Maize	mitochondrion, plastid	35.89	31.71
TraesCS3B01G296500.1	Wheat	plastid	35.28	31.59
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	35.58	31.44
TraesCS3D01G263000.1	Wheat	plastid	35.58	31.44
Zm00001d011618_P001	Maize	plastid	33.13	31.03
HORVU0Hr1G006770.3	Barley	cytosol	26.38	30.94
Zm00001d043812_P001	Maize	plastid	33.44	30.79
KXG22495	Sorghum	mitochondrion	36.5	30.59
CDY18104	Canola	cytosol	26.38	30.39
TraesCS1D01G383600.1	Wheat	plastid	36.2	30.1
TraesCS1A01G376300.1	Wheat	plastid	35.89	29.77
KXG33157	Sorghum	mitochondrion, plastid	34.05	29.68
GSMUA_Achr9P21400_001	Banana	cytosol	24.23	28.52
CDY30532	Canola	cytosol	33.13	23.28
CDY45111	Canola	plastid	12.88	19.09
CDX88863	Canola	plastid	23.01	16.2
CDX70907	Canola	plastid	22.39	15.77
CDX77133	Canola	plastid	34.05	15.63

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	GO:A0A078D4U9	EnsemblPlants:CDX82308
ProteinID:CDX82308	ProteinID:CDX82308.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00137417001	InterPro:IPT
InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF51	MetaCyc:PWY-2781	SUPFAM:SSF52540
UniParc:UPI0004EF1BBA	SEG:seg	:	:	:	:

Description

BnaA03g35130D

Coordinates

chrLK031828:+:495137..496526

Molecular Weight (calculated)

36933.3 Da

IEP (calculated)

9.262

GRAVY (calculated)

-0.303

Length

326 amino acids

Sequence
(BLAST)

001: MQELTSTFVS RSLVPTTYTR PPQLRPKSIV PMTVCMDQSR KEKVVVIMGA TGTGKSRLSV GLAARFSGEI INSDKMQFYN GLEIATNQIT IPERCGVAHH
101: LLGELPVDDS ELTASEFRSV ASRSISEISS RGKLPIIAGG SNSFVHALLV DRFDPVTNPF SSKPSISSEL RYDCFFLLVD VSASVLYHYL SKRVDQMMES
201: GMFEELASFY NPRNSRSTIR TGIHQAIGVP EFDRYFGVYP PEKSHNVFEW DQARKAAYEE VVHEIKDNTW RLAKKQIERI MMLRSSGWEI HRLDATASLR
301: ASSREVWENK VLRESVKNVK RFLLKD

Best Arabidopsis Sequence Match ( AT3G19160.1 )
(BLAST)

001: MQNLTSTFVS PSMIPITSPR LRLPPPRSVV PMTTVCMEQS YKQKVVVIMG ATGSGKSCLS IDLATRFSGE IVNSDKIQFY DGLKVTTNQM SILERCGVPH
101: HLLGELPPDD SELTTSEFRS LASRSISEIT ARGNLPIIAG GSNSFIHALL VDRFDPKTYP FSSETSISSG LRYECCFLWV DVSVSVLFEY LSKRVDQMME
201: SGMFEELAGF YDPRYSGSAI RAHGIHKTIG IPEFDRYFSL YPPERKQKMS EWDQARKGAY DEAVQEIKEN TWRLAKKQIE RIMKLKSSGW DIQRLDATPS
301: FGRSSREIWD NTVLDESIKV VKRFLVKDKV

Arabidopsis Description

IPT8Adenylate isopentenyltransferase 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.