CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
vacuole 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007728.1-P	Field mustard	plastid	100.0	100.0
CDY67797	Canola	mitochondrion	96.69	96.69
CDX93935	Canola	plastid	85.54	85.03
CDX89173	Canola	mitochondrion, plastid	84.94	84.43
AT3G63110.1	Thale cress	plastid	82.83	81.85
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	54.22	56.07
VIT_09s0070g00710.t01	Wine grape	mitochondrion	49.7	53.23
KRH67172	Soybean	plastid	46.99	50.49
Solyc09g064910.1.1	Tomato	mitochondrion	47.59	50.32
PGSC0003DMT400002509	Potato	mitochondrion	47.59	49.53
KRG95498	Soybean	mitochondrion	45.78	49.03
KRH71448	Soybean	golgi, mitochondrion, plastid	48.19	48.93
KRH31999	Soybean	mitochondrion	50.0	48.26
CDY13945	Canola	mitochondrion	48.19	47.9
CDY47191	Canola	cytosol	47.59	47.73
CDY02590	Canola	cytosol	47.89	47.6
CDX92563	Canola	mitochondrion	47.59	47.31
HORVU5Hr1G110100.1	Barley	mitochondrion	42.77	47.02
CDY22984	Canola	plastid	42.17	45.6
CDX85119	Canola	plastid	45.18	45.18
GSMUA_AchrUn_...	Banana	cytosol	38.86	45.1
CDX77492	Canola	plastid	44.88	44.88
Zm00001d034584_P001	Maize	plastid	44.28	44.68
TraesCS5A01G181100.1	Wheat	mitochondrion	38.55	43.84
CDX95461	Canola	plastid	42.77	43.83
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	38.55	43.69
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	38.55	43.69
CDX82308	Canola	plastid	42.77	43.56
CDY18571	Canola	plastid	42.47	43.52
HORVU3Hr1G025950.1	Barley	cytosol	44.88	43.06
OQU90772	Sorghum	plastid	43.98	42.94
TraesCS3D01G137000.1	Wheat	cytosol, plastid	45.18	42.86
Os07t0211700-00	Rice	plastid	44.58	42.65
Os03t0810100-01	Rice	extracellular	45.78	42.58
Zm00001d013021_P001	Maize	plastid	43.07	42.43
TraesCS3A01G136200.1	Wheat	mitochondrion	43.98	42.2
CDY07385	Canola	plastid	40.66	42.19
Zm00001d005239_P001	Maize	plastid	43.98	42.07
Zm00001d019171_P001	Maize	plastid	45.78	41.76
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	43.37	41.62
TraesCS5B01G469600.1	Wheat	cytosol	43.98	41.6
TraesCS5D01G471100.1	Wheat	cytosol	43.98	41.6
TraesCS5A01G460000.1	Wheat	plastid	43.98	41.6
EER96067	Sorghum	plastid	44.88	41.16
Os05t0311801-00	Rice	cytosol	42.17	41.06
CDY44896	Canola	plastid	41.27	40.9
CDY04228	Canola	plastid	39.16	40.75
Zm00001d040810_P001	Maize	cytosol	43.07	40.62
EES02950	Sorghum	cytosol	44.58	40.22
Os03t0356900-01	Rice	extracellular	39.16	40.0
CDX81518	Canola	plastid	41.87	39.94
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	37.95	39.25
TraesCS5D01G185500.1	Wheat	plastid	37.65	38.94
Os03t0358900-00	Rice	cytosol	37.95	38.41
Zm00001d003869_P001	Maize	cytosol	37.05	38.2
CDY18104	Canola	cytosol	32.53	38.16
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	35.54	36.2
EES12063	Sorghum	cytosol	37.05	36.18
GSMUA_AchrUn_...	Banana	mitochondrion	37.65	35.82
TraesCS1B01G323900.1	Wheat	plastid	27.71	32.86
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	37.35	31.63
TraesCS1A01G057000.1	Wheat	cytosol	36.14	30.77
CDY30532	Canola	cytosol	31.02	22.2
CDY45111	Canola	plastid	14.16	21.36
CDX88863	Canola	plastid	22.59	16.2
CDX70907	Canola	plastid	22.59	16.2
CDX77133	Canola	plastid	31.93	14.93

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	GO:A0A078JE18	UniProt:A0A078JE18
EnsemblPlants:CDY63340	ProteinID:CDY63340	ProteinID:CDY63340.1	GO:GO:0006139	GO:GO:0008033	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00039199001	InterPro:IPT	InterPro:P-loop_NTPase	PFAM:PF01715
PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	MetaCyc:PWY-2781	SUPFAM:SSF52540	UniParc:UPI00005A9B2C	SEG:seg

Description

BnaA09g55640DBnaA09g55640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE18]

Coordinates

chrLK034284:-:31868..33155

Molecular Weight (calculated)

37570.5 Da

IEP (calculated)

8.271

GRAVY (calculated)

-0.187

Length

332 amino acids

Sequence
(BLAST)

001: MIMKISMAMC KQSLPPSTNL EFSPARFGPN MLTLNPYVPK EKVVVIMGAT GTGKSRLSVD LATRFQAEII NSDKIQVHQG LDIVTNKITT EERCGVPHHL
101: LSVLPPQADL TAANFCHMAN LSVESVLNRG KLPIIVGGSN SYVEALVDDD DYKFRSKYDC CFLWVDVALP VLNRFVSERV DKMVQNGMVE EARDFFDYSD
201: SDYSRGIKKA IGVPEFDIFF RNEPFLNLGD REALLNKVVD EIKSNTFKLA CRQREKIERL RKIKKWCIQR LDATPVITRR RSKVDADVAW ERLVARPSTE
301: AVSRFLLDID SPRMFVEAST GAVREREMSL VA

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.