Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 3
- cytosol 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93935 | Canola | plastid | 84.23 | 84.73 |
| Bra040431.1-P | Field mustard | mitochondrion, plastid | 83.93 | 84.43 |
| CDX89173 | Canola | mitochondrion, plastid | 83.93 | 84.43 |
| CDY67797 | Canola | mitochondrion | 82.74 | 83.73 |
| Bra007728.1-P | Field mustard | plastid | 81.85 | 82.83 |
| CDY63340 | Canola | plastid | 81.85 | 82.83 |
| VIT_07s0104g00270.t01 | Wine grape | cytosol, mitochondrion, plastid | 54.17 | 56.7 |
| VIT_09s0070g00710.t01 | Wine grape | mitochondrion | 50.6 | 54.84 |
| KRH67172 | Soybean | plastid | 49.11 | 53.4 |
| KRG95498 | Soybean | mitochondrion | 48.21 | 52.26 |
| Solyc09g064910.1.1 | Tomato | mitochondrion | 47.02 | 50.32 |
| AT5G19040.1 | Thale cress | mitochondrion | 48.81 | 49.7 |
| PGSC0003DMT400002509 | Potato | mitochondrion | 47.02 | 49.53 |
| KRH71448 | Soybean | golgi, mitochondrion, plastid | 47.32 | 48.62 |
| KRH31999 | Soybean | mitochondrion | 48.21 | 47.09 |
| HORVU5Hr1G110100.1 | Barley | mitochondrion | 42.26 | 47.02 |
| AT3G23630.1 | Thale cress | mitochondrion, plastid | 45.54 | 46.5 |
| Zm00001d034584_P001 | Maize | plastid | 44.64 | 45.59 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.69 | 45.45 |
| Os07t0211700-00 | Rice | plastid | 46.73 | 45.24 |
| HORVU3Hr1G025950.1 | Barley | cytosol | 45.54 | 44.22 |
| Zm00001d013021_P001 | Maize | plastid | 43.75 | 43.62 |
| OQU90772 | Sorghum | plastid | 43.75 | 43.24 |
| Os03t0810100-01 | Rice | extracellular | 45.83 | 43.14 |
| TraesCS3A01G136200.1 | Wheat | mitochondrion | 44.35 | 43.06 |
| HORVU5Hr1G055240.1 | Barley | cytosol, mitochondrion | 37.5 | 43.0 |
| HORVU5Hr1G055220.1 | Barley | cytosol, mitochondrion | 37.5 | 43.0 |
| TraesCS5A01G181100.1 | Wheat | mitochondrion | 37.2 | 42.81 |
| TraesCS3B01G154100.1 | Wheat | cytosol, mitochondrion, plastid | 44.05 | 42.77 |
| Zm00001d005239_P001 | Maize | plastid | 44.05 | 42.65 |
| Zm00001d019171_P001 | Maize | plastid | 46.13 | 42.58 |
| TraesCS3D01G137000.1 | Wheat | cytosol, plastid | 44.35 | 42.57 |
| EER96067 | Sorghum | plastid | 45.24 | 41.99 |
| TraesCS5A01G460000.1 | Wheat | plastid | 43.75 | 41.88 |
| TraesCS5D01G471100.1 | Wheat | cytosol | 43.45 | 41.6 |
| TraesCS5B01G469600.1 | Wheat | cytosol | 43.45 | 41.6 |
| AT3G19160.1 | Thale cress | plastid | 40.48 | 41.21 |
| Os05t0311801-00 | Rice | cytosol | 41.37 | 40.76 |
| AT4G24650.1 | Thale cress | cytosol | 37.5 | 39.62 |
| Zm00001d040810_P001 | Maize | cytosol | 41.37 | 39.49 |
| AT1G68460.1 | Thale cress | plastid | 41.67 | 39.22 |
| EES02950 | Sorghum | cytosol | 42.86 | 39.13 |
| Os03t0356900-01 | Rice | extracellular | 37.8 | 39.08 |
| TraesCS5B01G178800.1 | Wheat | mitochondrion, plastid | 36.9 | 38.63 |
| TraesCS5D01G185500.1 | Wheat | plastid | 36.31 | 38.01 |
| Os03t0358900-00 | Rice | cytosol | 36.31 | 37.2 |
| AT1G25410.1 | Thale cress | plastid | 37.5 | 36.84 |
| TraesCS1B01G074400.1 | Wheat | cytosol, mitochondrion, plastid | 35.71 | 36.81 |
| Zm00001d003869_P001 | Maize | cytosol | 34.82 | 36.34 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 37.5 | 36.1 |
| EES12063 | Sorghum | cytosol | 35.42 | 35.0 |
| TraesCS1B01G323900.1 | Wheat | plastid | 27.98 | 33.57 |
| HORVU1Hr1G011480.1 | Barley | cytosol, mitochondrion, plastid | 37.5 | 32.14 |
| TraesCS1A01G057000.1 | Wheat | cytosol | 36.61 | 31.54 |
| AT2G27760.1 | Thale cress | cytosol | 29.76 | 21.46 |
| AT5G20040.3 | Thale cress | mitochondrion | 21.73 | 15.56 |
Protein Annotations
| KEGG:00908+2.5.1.75 | Gene3D:1.10.287.890 | MapMan:11.4.1.1 | Gene3D:3.40.50.300 | EntrezGene:825486 | UniProt:A0A178V8J2 |
| EMBL:AB061401 | EMBL:AB062610 | ProteinID:AEE80436.1 | ArrayExpress:AT3G63110 | EnsemblPlantsGene:AT3G63110 | RefSeq:AT3G63110 |
| TAIR:AT3G63110 | RefSeq:AT3G63110-TAIR-G | EnsemblPlants:AT3G63110.1 | TAIR:AT3G63110.1 | Symbol:ATIPT3 | EMBL:AY125508 |
| EMBL:BT001075 | ProteinID:CAB87756.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006400 | GO:GO:0008033 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009691 | GO:GO:0009824 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0031965 | GO:GO:0052381 | GO:GO:0052622 |
| GO:GO:0052623 | InterPro:IPT | RefSeq:NP_567138.1 | ProteinID:OAP02216.1 | InterPro:P-loop_NTPase | PFAM:PF01715 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR11088 | PANTHER:PTHR11088:SF49 |
| UniProt:Q93WC9 | SUPFAM:SSF52540 | UniParc:UPI00000AC079 | SEG:seg | : | : |
Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
Coordinates
chr3:-:23317971..23319636
Molecular Weight (calculated)
37916.9 Da
IEP (calculated)
8.278
GRAVY (calculated)
-0.210
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.