Factsheet for Os03t0356900-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0358900-00	Rice	cytosol	75.08	74.39
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	64.62	64.42
Zm00001d003869_P001	Maize	cytosol	63.69	64.29
EES12063	Sorghum	cytosol	63.08	60.29
TraesCS5D01G185500.1	Wheat	plastid	57.85	58.57
Solyc11g027990.1.1	Tomato	cytosol	10.46	57.63
Solyc11g019850.1.1	Tomato	cytosol	9.23	55.56
Solyc11g063730.1.1	Tomato	cytosol	8.31	55.1
TraesCS1A01G057000.1	Wheat	cytosol	65.85	54.87
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	65.85	54.59
Solyc11g061800.1.1	Tomato	cytosol	8.31	54.0
Solyc08g061790.1.1	Tomato	cytosol	9.85	51.61
Solyc11g019900.1.1	Tomato	cytosol	9.23	50.85
Solyc11g061780.1.1	Tomato	cytosol	8.0	47.27
Os05t0311801-00	Rice	cytosol	49.54	47.21
Solyc11g063470.1.1	Tomato	cytosol	7.69	46.3
VIT_08s0040g01010.t01	Wine grape	cytosol, nucleus, plastid	36.0	45.35
PGSC0003DMT400086561	Potato	cytosol	14.15	45.1
Solyc11g019880.1.1	Tomato	cytosol	16.62	44.63
Solyc11g061860.1.1	Tomato	cytosol	19.08	44.6
PGSC0003DMT400087375	Potato	cytosol	11.38	44.58
PGSC0003DMT400097056	Potato	mitochondrion	15.69	43.59
PGSC0003DMT400091323	Potato	cytosol	19.69	43.54
Solyc11g020400.1.1	Tomato	cytosol	15.08	43.36
PGSC0003DMT400085022	Potato	cytosol	36.31	43.07
PGSC0003DMT400088950	Potato	cytosol	27.69	42.25
PGSC0003DMT400088039	Potato	cytosol	18.15	41.84
VIT_07s0104g00270.t01	Wine grape	cytosol, mitochondrion, plastid	41.23	41.74
Os03t0810100-01	Rice	extracellular	45.85	41.74
PGSC0003DMT400085545	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	21.54	41.67
PGSC0003DMT400090456	Potato	cytosol, mitochondrion, plastid	14.46	41.59
PGSC0003DMT400092576	Potato	cytosol	20.0	41.4
PGSC0003DMT400097535	Potato	mitochondrion	22.15	41.38
PGSC0003DMT400097181	Potato	cytosol	27.08	41.31
GSMUA_Achr5P07950_001	Banana	cytosol	42.15	41.02
PGSC0003DMT400097110	Potato	cytosol	20.31	40.24
PGSC0003DMT400091824	Potato	cytosol, mitochondrion, nucleus	22.15	40.22
PGSC0003DMT400087535	Potato	cytosol	33.54	40.07
Os07t0211700-00	Rice	plastid	42.77	40.06
PGSC0003DMT400091399	Potato	cytosol	17.54	39.86
Solyc11g061870.1.1	Tomato	cytosol	24.92	39.71
Solyc11g063710.1.1	Tomato	cytosol	24.92	39.71
VIT_05s0020g02630.t01	Wine grape	cytosol	40.31	39.7
AT5G19040.1	Thale cress	mitochondrion	40.0	39.39
VIT_09s0070g00710.t01	Wine grape	mitochondrion	37.54	39.35
Solyc11g063740.1.1	Tomato	cytosol	24.62	39.22
Bra007728.1-P	Field mustard	plastid	40.0	39.16
CDY63340	Canola	plastid	40.0	39.16
CDY67797	Canola	mitochondrion	40.0	39.16
PGSC0003DMT400088770	Potato	cytosol	18.77	39.1
PGSC0003DMT400092830	Potato	cytosol	19.08	38.99
CDX92563	Canola	mitochondrion	40.0	38.92
Solyc11g020380.1.1	Tomato	cytosol	23.69	38.89
Bra023701.1-P	Field mustard	cytosol	39.38	38.67
CDY47191	Canola	cytosol	39.38	38.67
PGSC0003DMT400084902	Potato	cytosol	20.92	38.64
Bra002204.1-P	Field mustard	mitochondrion	39.69	38.62
CDY13945	Canola	mitochondrion	39.69	38.62
PGSC0003DMT400090908	Potato	cytosol	27.08	38.6
PGSC0003DMT400094689	Potato	cytosol, mitochondrion, peroxisome	26.15	38.29
KRH01762	Soybean	extracellular, golgi, vacuole	39.08	38.14
Solyc11g061900.1.1	Tomato	cytosol	23.08	38.07
Solyc08g061680.1.1	Tomato	cytosol, mitochondrion, nucleus	24.0	38.05
Solyc11g019890.1.1	Tomato	cytosol	24.0	38.05
Bra040431.1-P	Field mustard	mitochondrion, plastid	39.08	38.02
CDX89173	Canola	mitochondrion, plastid	39.08	38.02
CDX93935	Canola	plastid	39.08	38.02
CDY02590	Canola	cytosol	39.08	38.02
AT3G23630.1	Thale cress	mitochondrion, plastid	38.46	37.99
PGSC0003DMT400096405	Potato	cytosol	19.38	37.95
KRH46921	Soybean	cytosol	34.15	37.88
AT3G63110.1	Thale cress	plastid	39.08	37.8
Solyc11g063690.1.1	Tomato	cytosol	18.46	37.74
PGSC0003DMT400086264	Potato	cytosol	32.62	37.72
KRH71448	Soybean	golgi, mitochondrion, plastid	37.85	37.61
Solyc11g061830.1.1	Tomato	cytosol	23.38	37.25
CDX77492	Canola	plastid	37.85	37.05
PGSC0003DMT400086959	Potato	cytosol	9.23	37.04
Solyc09g064910.1.1	Tomato	mitochondrion	35.69	36.94
KRH67172	Soybean	plastid	35.08	36.89
PGSC0003DMT400094329	Potato	cytosol, mitochondrion, nucleus	15.08	36.84
KRG95498	Soybean	mitochondrion	35.08	36.77
Bra014968.1-P	Field mustard	plastid	37.54	36.75
CDX85119	Canola	plastid	37.54	36.75
Solyc11g061810.1.1	Tomato	cytosol, mitochondrion, nucleus	20.31	36.67
PGSC0003DMT400002509	Potato	mitochondrion	35.69	36.36
KRH51017	Soybean	plastid	37.54	36.31
KRH11376	Soybean	extracellular	38.15	36.26
PGSC0003DMT400083203	Potato	cytosol	36.62	36.06
PGSC0003DMT400088851	Potato	cytosol	26.46	35.98
KRH02126	Soybean	plastid	37.54	35.88
GSMUA_Achr3P09080_001	Banana	extracellular	36.62	35.63
Solyc11g061890.1.1	Tomato	cytosol	13.54	35.48
KRH31999	Soybean	mitochondrion	37.54	35.47
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	35.69	35.26
PGSC0003DMT400088899	Potato	cytosol	24.0	35.14
PGSC0003DMT400090073	Potato	cytosol	26.15	34.98
PGSC0003DMT400091271	Potato	cytosol	13.54	34.92
PGSC0003DMT400089640	Potato	mitochondrion	27.69	34.88
Solyc08g061690.1.1	Tomato	cytosol	21.23	34.85
Bra028326.1-P	Field mustard	plastid	32.0	34.55
PGSC0003DMT400088320	Potato	cytosol	14.46	34.31
PGSC0003DMT400087595	Potato	cytosol	14.46	34.06
Os01t0688300-00	Rice	mitochondrion	35.08	33.93
Os07t0190150-00	Rice	cytosol	24.31	33.62
PGSC0003DMT400088552	Potato	cytosol	19.08	33.51
PGSC0003DMT400093770	Potato	cytosol, mitochondrion, plastid	20.31	33.5
PGSC0003DMT400090406	Potato	cytosol	33.23	33.33
PGSC0003DMT400086310	Potato	cytosol	12.31	32.79
CDY18104	Canola	cytosol	28.0	32.16
PGSC0003DMT400097346	Potato	cytosol	13.23	32.09
Os05t0551700-01	Rice	mitochondrion	35.38	31.94
PGSC0003DMT400093491	Potato	cytosol	24.0	31.84
PGSC0003DMT400093701	Potato	cytosol	24.31	31.73
PGSC0003DMT400095880	Potato	cytosol	12.62	30.83
KRH20915	Soybean	cytosol	14.46	30.52
PGSC0003DMT400090690	Potato	cytosol	12.92	30.22
PGSC0003DMT400089330	Potato	cytosol	26.15	29.93
PGSC0003DMT400068919	Potato	cytosol, mitochondrion, nucleus	15.69	29.48
PGSC0003DMT400090318	Potato	cytosol	9.23	28.85
PGSC0003DMT400087380	Potato	cytosol	14.77	28.57
PGSC0003DMT400092288	Potato	cytosol	17.23	26.42
PGSC0003DMT400086337	Potato	cytosol	24.0	26.35
PGSC0003DMT400091817	Potato	cytosol	12.31	26.32
PGSC0003DMT400087085	Potato	cytosol	24.0	26.17
PGSC0003DMT400096448	Potato	cytosol	8.31	25.96
PGSC0003DMT400085014	Potato	cytosol	17.85	25.89
PGSC0003DMT400096037	Potato	cytosol	8.0	25.74
PGSC0003DMT400094882	Potato	cytosol	17.54	25.33
Solyc11g019860.1.1	Tomato	cytoskeleton, cytosol	23.69	25.33
PGSC0003DMT400086709	Potato	cytosol	19.69	25.1
PGSC0003DMT400085869	Potato	cytosol	26.77	24.65
Os01t0968700-01	Rice	cytosol	34.77	24.46
PGSC0003DMT400095385	Potato	cytosol	30.15	23.79
PGSC0003DMT400085031	Potato	cytosol	9.54	23.66
PGSC0003DMT400068836	Potato	cytosol	14.46	23.5
PGSC0003DMT400090493	Potato	cytosol	26.46	23.31
PGSC0003DMT400093314	Potato	cytosol	22.46	23.03
PGSC0003DMT400088765	Potato	cytosol	20.62	22.71
PGSC0003DMT400095744	Potato	cytosol	12.0	21.67
PGSC0003DMT400093361	Potato	cytosol	28.92	20.13
PGSC0003DMT400026622	Potato	cytosol	13.85	13.6
PGSC0003DMT400096524	Potato	cytosol, nucleus	32.92	9.63

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.287.890	MapMan:11.4.1.1	Gene3D:3.40.50.300	EntrezGene:4332870	EMBL:AB239798
ProteinID:ABF96042.1	EMBL:AK240967	ProteinID:BAF12055.1	ProteinID:BAS84254.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0006400	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0052381	InterPro:IPT	EnsemblPlantsGene:Os03g0356900	EnsemblPlants:Os03t0356900-01	InterPro:P-loop_NTPase	PFAM:PF01715
PANTHER:PTHR11088	PANTHER:PTHR11088:SF37	UniProt:Q33CD9	SUPFAM:SSF52540	UniParc:UPI00005DAD6A	RefSeq:XP_015630300.1
SEG:seg	:	:	:	:	:

Description

ADENOSINE PHOSPHATE ISOPENTENYLTRANSFERASE 2tRNA isopentenyltransferase family protein. (Os03t0356900-01)

Coordinates

chr3:+:13796252..13799655

Molecular Weight (calculated)

34602.3 Da

IEP (calculated)

5.886

GRAVY (calculated)

-0.006

Length

325 amino acids

Sequence
(BLAST)

001: MEYHVGGVIG QSPKPKVVFV LGATATGKSK LAISIAERFG GEVINSDKIQ VHDGFPIITN KVTEEERAGV PHHLLGVLHP DADFTAEDFR REAAAAVARV
101: LAAGRLPVVA GGSNTYVEAL VEGGGGAFRA AHDCLFLWTD VAPGLLRWYT AARVDDMVRR GLVGEARAGF VDGAGAADYY TRGVRRAIGI PEMHGYLLAE
201: RSGGEAADDG ELAAMLDGAV REIKANTYRL AATQVAKIRR LSALDGWDVR RVDATVVVAR MAEGAPHRET WEAVVWKPCE EMVGRFLEAS AAVDDDDNAA
301: AGSPAALAPM TAACRLRAQL VQLQY

Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)

001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA

Arabidopsis Description

IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.