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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400097110 Potato cytosol 68.67 69.51
PGSC0003DMT400091323 Potato cytosol 59.64 67.35
PGSC0003DMT400088039 Potato cytosol 55.42 65.25
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 43.37 63.72
PGSC0003DMT400088770 Potato cytosol 59.04 62.82
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 83.73 62.61
PGSC0003DMT400097181 Potato cytosol 80.12 62.44
PGSC0003DMT400088950 Potato cytosol 78.31 61.03
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 60.24 59.52
PGSC0003DMT400086561 Potato cytosol 36.14 58.82
PGSC0003DMT400097056 Potato mitochondrion 40.96 58.12
PGSC0003DMT400091399 Potato cytosol 47.59 55.24
PGSC0003DMT400092830 Potato cytosol 48.8 50.94
PGSC0003DMT400088552 Potato cytosol 56.63 50.81
PGSC0003DMT400092576 Potato cytosol 46.99 49.68
PGSC0003DMT400090908 Potato cytosol 66.27 48.25
PGSC0003DMT400086264 Potato cytosol 81.33 48.04
PGSC0003DMT400087535 Potato cytosol 78.31 47.79
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 56.02 47.21
PGSC0003DMT400097535 Potato mitochondrion 48.8 46.55
PGSC0003DMT400087375 Potato cytosol 22.29 44.58
PGSC0003DMT400089640 Potato mitochondrion 68.07 43.8
PGSC0003DMT400085014 Potato cytosol 58.43 43.3
PGSC0003DMT400084902 Potato cytosol 45.78 43.18
PGSC0003DMT400088851 Potato cytosol 60.84 42.26
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 33.13 41.35
PGSC0003DMT400088320 Potato cytosol 32.53 39.42
PGSC0003DMT400086709 Potato cytosol 60.24 39.22
PGSC0003DMT400093491 Potato cytosol 57.83 39.18
PGSC0003DMT400089330 Potato cytosol 65.06 38.03
PGSC0003DMT400092288 Potato cytosol 48.19 37.74
PGSC0003DMT400086959 Potato cytosol 18.07 37.04
PGSC0003DMT400087085 Potato cytosol 66.27 36.91
PGSC0003DMT400090406 Potato cytosol 69.88 35.8
PGSC0003DMT400085022 Potato cytosol 57.83 35.04
PGSC0003DMT400090073 Potato cytosol 50.0 34.16
PGSC0003DMT400093701 Potato cytosol 51.2 34.14
PGSC0003DMT400085869 Potato cytosol 72.29 33.99
PGSC0003DMT400088899 Potato cytosol 45.18 33.78
PGSC0003DMT400090493 Potato cytosol 74.7 33.6
PGSC0003DMT400086337 Potato cytosol 57.23 32.09
PGSC0003DMT400095385 Potato cytosol 73.49 29.61
PGSC0003DMT400088765 Potato cytosol 51.81 29.15
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 43.37 27.91
PGSC0003DMT400093314 Potato cytosol 53.01 27.76
PGSC0003DMT400093361 Potato cytosol 75.9 26.98
PGSC0003DMT400091271 Potato cytosol 18.67 24.6
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 26.51 24.58
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 24.7 23.7
PGSC0003DMT400083203 Potato cytosol 45.78 23.03
KRH46921 Soybean cytosol 40.36 22.87
KRH01762 Soybean extracellular, golgi, vacuole 45.78 22.82
PGSC0003DMT400002509 Potato mitochondrion 43.37 22.57
PGSC0003DMT400037749 Potato cytosol 37.35 21.91
TraesCS5A01G181100.1 Wheat mitochondrion 37.95 21.58
HORVU5Hr1G110100.1 Barley mitochondrion 39.16 21.52
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 37.95 21.5
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 37.95 21.5
PGSC0003DMT400087380 Potato cytosol 21.69 21.43
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 40.36 20.55
HORVU3Hr1G025950.1 Barley cytosol 42.77 20.52
PGSC0003DMT400015411 Potato cytosol 34.34 20.5
Zm00001d034584_P001 Maize plastid 40.36 20.36
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 41.57 19.94
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 38.55 19.94
TraesCS3A01G136200.1 Wheat mitochondrion 40.96 19.65
TraesCS5D01G185500.1 Wheat plastid 37.95 19.63
Zm00001d013021_P001 Maize plastid 39.76 19.58
Zm00001d003869_P001 Maize cytosol 37.95 19.57
TraesCS3D01G137000.1 Wheat cytosol, plastid 40.96 19.43
OQU90772 Sorghum plastid 39.76 19.41
Os03t0356900-01 Rice extracellular 37.95 19.38
EER96067 Sorghum plastid 42.17 19.34
Zm00001d040810_P001 Maize cytosol 40.96 19.32
Zm00001d005239_P001 Maize plastid 40.36 19.31
TraesCS5A01G460000.1 Wheat plastid 40.36 19.09
TraesCS5B01G469600.1 Wheat cytosol 40.36 19.09
Os07t0211700-00 Rice plastid 39.76 19.02
TraesCS1B01G323900.1 Wheat plastid 31.93 18.93
Os03t0358900-00 Rice cytosol 37.35 18.9
TraesCS5D01G471100.1 Wheat cytosol 39.76 18.8
Os05t0311801-00 Rice cytosol 38.55 18.77
PGSC0003DMT400094882 Potato cytosol 25.3 18.67
EES12063 Sorghum cytosol 37.95 18.53
Os03t0810100-01 Rice extracellular 39.76 18.49
EES02950 Sorghum cytosol 39.76 17.93
PGSC0003DMT400097346 Potato cytosol 14.46 17.91
Zm00001d019171_P001 Maize plastid 39.16 17.86
PGSC0003DMT400085031 Potato cytosol 13.86 17.56
PGSC0003DMT400095880 Potato cytosol 13.86 17.29
PGSC0003DMT400086310 Potato cytosol 12.65 17.21
PGSC0003DMT400068271 Potato cytosol 39.16 17.15
TraesCS1A01G057000.1 Wheat cytosol 38.55 16.41
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 37.95 16.07
PGSC0003DMT400087595 Potato cytosol 13.25 15.94
PGSC0003DMT400026622 Potato cytosol 31.33 15.71
PGSC0003DMT400091817 Potato cytosol 13.86 15.13
PGSC0003DMT400090690 Potato cytosol 12.65 15.11
PGSC0003DMT400068836 Potato cytosol 16.27 13.5
PGSC0003DMT400096524 Potato cytosol, nucleus 75.9 11.34
PGSC0003DMT400039795 Potato mitochondrion 23.49 8.67
PGSC0003DMT400095744 Potato cytosol 6.63 6.11
PGSC0003DMT400096448 Potato cytosol 1.81 2.88
PGSC0003DMT400096037 Potato cytosol 1.2 1.98
PGSC0003DMT400090318 Potato cytosol 0.6 0.96
Protein Annotations
EnsemblPlants:PGSC0003DMT400096405EnsemblPlantsGene:PGSC0003DMG400045976Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75PANTHER:PTHR11088
PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400045976SEG:segSUPFAM:SSF52540UniParc:UPI0002969088
UniProt:M1DYC8MapMan:50.2.5::::
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400045976]
Coordinates
chr00:-:39682652..39683500
Molecular Weight (calculated)
18888.6 Da
IEP (calculated)
7.411
GRAVY (calculated)
-0.342
Length
166 amino acids
Sequence
(BLAST)
001: MNTFINNNNK FNKKKVVFIM GATGTGKSRL SVDLATQKSP ETDIRSQSYG REIEPDSNFT AEDFSLKSNI YIETILKAQC VPIIVGGSNS YIEKLVEDPV
101: FMFKHKYDGC FIWIDVEQSV LNRRVHTRVD DMVNAGQVDE VRQIFIPDAD YTKRIRLSIG VPEMAK
Best Arabidopsis Sequence Match ( AT5G19040.1 )
(BLAST)
001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR
Arabidopsis Description
IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.