Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086561 | Potato | cytosol | 48.11 | 87.25 |
| PGSC0003DMT400090456 | Potato | cytosol, mitochondrion, plastid | 51.89 | 84.96 |
| PGSC0003DMT400087375 | Potato | cytosol | 34.05 | 75.9 |
| PGSC0003DMT400097110 | Potato | cytosol | 63.78 | 71.95 |
| PGSC0003DMT400091323 | Potato | cytosol | 56.22 | 70.75 |
| PGSC0003DMT400088039 | Potato | cytosol | 51.89 | 68.09 |
| PGSC0003DMT400097056 | Potato | mitochondrion | 41.62 | 65.81 |
| PGSC0003DMT400085545 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 56.76 | 62.5 |
| PGSC0003DMT400091399 | Potato | cytosol | 48.11 | 62.24 |
| PGSC0003DMT400094329 | Potato | cytosol, mitochondrion, nucleus | 41.62 | 57.89 |
| PGSC0003DMT400097181 | Potato | cytosol | 65.41 | 56.81 |
| PGSC0003DMT400096405 | Potato | cytosol | 50.81 | 56.63 |
| PGSC0003DMT400088950 | Potato | cytosol | 62.7 | 54.46 |
| PGSC0003DMT400094689 | Potato | cytosol, mitochondrion, peroxisome | 64.86 | 54.05 |
| PGSC0003DMT400084902 | Potato | cytosol | 49.73 | 52.27 |
| PGSC0003DMT400092576 | Potato | cytosol | 43.24 | 50.96 |
| PGSC0003DMT400088770 | Potato | cytosol | 42.7 | 50.64 |
| PGSC0003DMT400093770 | Potato | cytosol, mitochondrion, plastid | 53.51 | 50.25 |
| PGSC0003DMT400097535 | Potato | mitochondrion | 47.03 | 50.0 |
| PGSC0003DMT400086709 | Potato | cytosol | 58.92 | 42.75 |
| PGSC0003DMT400092288 | Potato | cytosol | 48.65 | 42.45 |
| PGSC0003DMT400086264 | Potato | cytosol | 64.32 | 42.35 |
| PGSC0003DMT400087535 | Potato | cytosol | 61.62 | 41.91 |
| PGSC0003DMT400092830 | Potato | cytosol | 35.14 | 40.88 |
| PGSC0003DMT400090908 | Potato | cytosol | 48.65 | 39.47 |
| PGSC0003DMT400089640 | Potato | mitochondrion | 54.05 | 38.76 |
| PGSC0003DMT400068919 | Potato | cytosol, mitochondrion, nucleus | 35.68 | 38.15 |
| PGSC0003DMT400085031 | Potato | cytosol | 26.49 | 37.4 |
| PGSC0003DMT400090073 | Potato | cytosol | 47.57 | 36.21 |
| PGSC0003DMT400088899 | Potato | cytosol | 43.24 | 36.04 |
| PGSC0003DMT400089330 | Potato | cytosol | 52.97 | 34.51 |
| PGSC0003DMT400087380 | Potato | cytosol | 30.27 | 33.33 |
| PGSC0003DMT400090406 | Potato | cytosol | 56.76 | 32.41 |
| PGSC0003DMT400093491 | Potato | cytosol | 42.7 | 32.24 |
| PGSC0003DMT400088851 | Potato | cytosol | 41.62 | 32.22 |
| PGSC0003DMT400088765 | Potato | cytosol | 50.27 | 31.53 |
| PGSC0003DMT400090493 | Potato | cytosol | 62.16 | 31.17 |
| PGSC0003DMT400087085 | Potato | cytosol | 49.73 | 30.87 |
| PGSC0003DMT400093314 | Potato | cytosol | 52.43 | 30.6 |
| PGSC0003DMT400093701 | Potato | cytosol | 40.54 | 30.12 |
| PGSC0003DMT400085022 | Potato | cytosol | 43.78 | 29.56 |
| PGSC0003DMT400085869 | Potato | cytosol | 55.68 | 29.18 |
| PGSC0003DMT400091824 | Potato | cytosol, mitochondrion, nucleus | 28.11 | 29.05 |
| PGSC0003DMT400085014 | Potato | cytosol | 35.14 | 29.02 |
| PGSC0003DMT400086337 | Potato | cytosol | 43.24 | 27.03 |
| PGSC0003DMT400095385 | Potato | cytosol | 60.0 | 26.94 |
| VIT_08s0040g01010.t01 | Wine grape | cytosol, nucleus, plastid | 35.14 | 25.19 |
| PGSC0003DMT400093361 | Potato | cytosol | 60.0 | 23.77 |
| PGSC0003DMT400026622 | Potato | cytosol | 42.16 | 23.57 |
| PGSC0003DMT400015411 | Potato | cytosol | 34.05 | 22.66 |
| TraesCS5A01G181100.1 | Wheat | mitochondrion | 35.14 | 22.26 |
| HORVU5Hr1G055220.1 | Barley | cytosol, mitochondrion | 35.14 | 22.18 |
| HORVU5Hr1G055240.1 | Barley | cytosol, mitochondrion | 35.14 | 22.18 |
| PGSC0003DMT400037749 | Potato | cytosol | 33.51 | 21.91 |
| KRH46921 | Soybean | cytosol | 34.59 | 21.84 |
| PGSC0003DMT400002509 | Potato | mitochondrion | 37.3 | 21.63 |
| TraesCS5B01G178800.1 | Wheat | mitochondrion, plastid | 36.22 | 20.87 |
| KRH01762 | Soybean | extracellular, golgi, vacuole | 36.76 | 20.42 |
| TraesCS5D01G185500.1 | Wheat | plastid | 34.59 | 19.94 |
| TraesCS1B01G074400.1 | Wheat | cytosol, mitochondrion, plastid | 34.59 | 19.63 |
| Zm00001d003869_P001 | Maize | cytosol | 34.05 | 19.57 |
| HORVU5Hr1G110100.1 | Barley | mitochondrion | 31.89 | 19.54 |
| PGSC0003DMT400083203 | Potato | cytosol | 34.59 | 19.39 |
| TraesCS1B01G323900.1 | Wheat | plastid | 29.19 | 19.29 |
| Os03t0356900-01 | Rice | extracellular | 33.51 | 19.08 |
| TraesCS3B01G154100.1 | Wheat | cytosol, mitochondrion, plastid | 35.68 | 19.08 |
| HORVU3Hr1G025950.1 | Barley | cytosol | 35.14 | 18.79 |
| TraesCS3D01G137000.1 | Wheat | cytosol, plastid | 34.59 | 18.29 |
| Zm00001d034584_P001 | Maize | plastid | 32.43 | 18.24 |
| EES12063 | Sorghum | cytosol | 33.51 | 18.24 |
| OQU90772 | Sorghum | plastid | 33.51 | 18.24 |
| PGSC0003DMT400068271 | Potato | cytosol | 37.3 | 18.21 |
| Zm00001d040810_P001 | Maize | cytosol | 34.59 | 18.18 |
| Os03t0358900-00 | Rice | cytosol | 31.89 | 17.99 |
| TraesCS3A01G136200.1 | Wheat | mitochondrion | 33.51 | 17.92 |
| Zm00001d005239_P001 | Maize | plastid | 33.51 | 17.87 |
| EER96067 | Sorghum | plastid | 34.59 | 17.68 |
| EES02950 | Sorghum | cytosol | 34.59 | 17.39 |
| TraesCS5A01G460000.1 | Wheat | plastid | 32.97 | 17.38 |
| Os05t0311801-00 | Rice | cytosol | 31.89 | 17.3 |
| Os07t0211700-00 | Rice | plastid | 32.43 | 17.29 |
| TraesCS5B01G469600.1 | Wheat | cytosol | 32.43 | 17.09 |
| TraesCS5D01G471100.1 | Wheat | cytosol | 32.43 | 17.09 |
| Os03t0810100-01 | Rice | extracellular | 32.97 | 17.09 |
| PGSC0003DMT400088320 | Potato | cytosol | 12.43 | 16.79 |
| Zm00001d019171_P001 | Maize | plastid | 32.97 | 16.76 |
| Zm00001d013021_P001 | Maize | plastid | 30.27 | 16.62 |
| TraesCS1A01G057000.1 | Wheat | cytosol | 33.51 | 15.9 |
| HORVU1Hr1G011480.1 | Barley | cytosol, mitochondrion, plastid | 32.97 | 15.56 |
| PGSC0003DMT400086959 | Potato | cytosol | 5.41 | 12.35 |
| PGSC0003DMT400094882 | Potato | cytosol | 14.59 | 12.0 |
| PGSC0003DMT400096524 | Potato | cytosol, nucleus | 58.92 | 9.81 |
| PGSC0003DMT400039795 | Potato | mitochondrion | 23.24 | 9.56 |
| PGSC0003DMT400091271 | Potato | cytosol | 4.32 | 6.35 |
| PGSC0003DMT400068836 | Potato | cytosol | 6.49 | 6.0 |
| PGSC0003DMT400095744 | Potato | cytosol | 5.41 | 5.56 |
| PGSC0003DMT400090690 | Potato | cytosol | 3.78 | 5.04 |
| PGSC0003DMT400086310 | Potato | cytosol | 3.24 | 4.92 |
| PGSC0003DMT400087595 | Potato | cytosol | 3.24 | 4.35 |
| PGSC0003DMT400091817 | Potato | cytosol | 3.24 | 3.95 |
| PGSC0003DMT400095880 | Potato | cytosol | 2.16 | 3.01 |
| PGSC0003DMT400097346 | Potato | cytosol | 2.16 | 2.99 |
| PGSC0003DMT400090318 | Potato | cytosol | 1.62 | 2.88 |
| PGSC0003DMT400096448 | Potato | cytosol | 1.62 | 2.88 |
| PGSC0003DMT400096037 | Potato | cytosol | 1.08 | 1.98 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400088552 | EnsemblPlantsGene:PGSC0003DMG400038123 | Gene3D:3.40.50.300 | GO:GO:0006139 | GO:GO:0008033 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | InterPro:IPT | InterPro:P-loop_NTPase | KEGG:00908+2.5.1.75 | PANTHER:PTHR11088 |
| PFAM:PF01715 | PGSC:PGSC0003DMG400038123 | SEG:seg | SUPFAM:SSF52540 | UniParc:UPI0002967985 | UniProt:M1DG79 |
| MapMan:50.2.5 | : | : | : | : | : |
Description
Isopentenyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400038123]
Coordinates
chr00:-:19702170..19704758
Molecular Weight (calculated)
21133.7 Da
IEP (calculated)
10.038
GRAVY (calculated)
-0.278
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTFINSNNK FNKKKVVFIM GATRKGKSCL SVHLATHFRG EIINWDKMQV YKGLEIVTNK ITHAEKQGVR HYLLGEFEPD SNFTAEDFCL KSNIYIETIL
101: KAQCFPIIVG GPNSYIEKHQ SVLNRRVDTR VDEMVNAAKM NTFNNNNNKF NKKKVVFIMG ATGMGKFCLS VDLATHFRGE IINYV
101: KAQCFPIIVG GPNSYIEKHQ SVLNRRVDTR VDEMVNAAKM NTFNNNNNKF NKKKVVFIMG ATGMGKFCLS VDLATHFRGE IINYV
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.