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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • plastid 1
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus, plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400086959 Potato cytosol 51.82 87.65
PGSC0003DMT400091271 Potato cytosol 68.61 74.6
PGSC0003DMT400086310 Potato cytosol 58.39 65.57
PGSC0003DMT400097346 Potato cytosol 54.74 55.97
PGSC0003DMT400096448 Potato cytosol 42.34 55.77
PGSC0003DMT400092830 Potato cytosol 64.23 55.35
PGSC0003DMT400092576 Potato cytosol 62.77 54.78
PGSC0003DMT400097535 Potato mitochondrion 68.61 54.02
PGSC0003DMT400095880 Potato cytosol 51.82 53.38
Solyc11g063690.1.1 Tomato cytosol 61.31 52.83
PGSC0003DMT400090690 Potato cytosol 53.28 52.52
PGSC0003DMT400091817 Potato cytosol 57.66 51.97
PGSC0003DMT400090908 Potato cytosol 86.13 51.75
PGSC0003DMT400096037 Potato cytosol 37.96 51.49
PGSC0003DMT400087595 Potato cytosol 51.82 51.45
PGSC0003DMT400088851 Potato cytosol 86.13 49.37
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 62.04 47.49
PGSC0003DMT400090318 Potato cytosol 35.77 47.12
PGSC0003DMT400093491 Potato cytosol 79.56 44.49
PGSC0003DMT400088950 Potato cytosol 68.61 44.13
PGSC0003DMT400087535 Potato cytosol 87.59 44.12
PGSC0003DMT400090073 Potato cytosol 77.37 43.62
PGSC0003DMT400088899 Potato cytosol 70.07 43.24
PGSC0003DMT400093701 Potato cytosol 78.1 42.97
PGSC0003DMT400084902 Potato cytosol 54.74 42.61
PGSC0003DMT400088770 Potato cytosol 48.18 42.31
PGSC0003DMT400086264 Potato cytosol 83.94 40.93
PGSC0003DMT400094882 Potato cytosol 63.5 38.67
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 62.04 38.29
PGSC0003DMT400068836 Potato cytosol 55.47 38.0
PGSC0003DMT400090406 Potato cytosol 86.86 36.73
PGSC0003DMT400089640 Potato mitochondrion 67.88 36.05
PGSC0003DMT400097181 Potato cytosol 54.74 35.21
PGSC0003DMT400095744 Potato cytosol 45.26 34.44
PGSC0003DMT400085014 Potato cytosol 56.2 34.38
PGSC0003DMT400096405 Potato cytosol 39.42 32.53
PGSC0003DMT400089330 Potato cytosol 64.23 30.99
PGSC0003DMT400087085 Potato cytosol 65.69 30.2
PGSC0003DMT400086337 Potato cytosol 64.23 29.73
PGSC0003DMT400085022 Potato cytosol 57.66 28.83
PGSC0003DMT400095385 Potato cytosol 85.4 28.4
PGSC0003DMT400090493 Potato cytosol 61.31 22.76
PGSC0003DMT400085869 Potato cytosol 58.39 22.66
PGSC0003DMT400091323 Potato cytosol 24.09 22.45
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 32.12 22.34
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 40.88 21.71
PGSC0003DMT400097110 Potato cytosol 23.36 19.51
PGSC0003DMT400093361 Potato cytosol 64.96 19.06
PGSC0003DMT400091399 Potato cytosol 19.71 18.88
PGSC0003DMT400002509 Potato mitochondrion 43.8 18.81
HORVU5Hr1G055220.1 Barley cytosol, mitochondrion 40.15 18.77
HORVU5Hr1G055240.1 Barley cytosol, mitochondrion 40.15 18.77
TraesCS5A01G181100.1 Wheat mitochondrion 39.42 18.49
HORVU5Hr1G110100.1 Barley mitochondrion 40.15 18.21
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 21.9 17.86
KRH46921 Soybean cytosol 37.96 17.75
PGSC0003DMT400083203 Potato cytosol 42.34 17.58
KRH01762 Soybean extracellular, golgi, vacuole 42.34 17.42
Zm00001d034584_P001 Maize plastid 41.61 17.33
PGSC0003DMT400037749 Potato cytosol 35.04 16.96
TraesCS5D01G185500.1 Wheat plastid 39.42 16.82
HORVU3Hr1G025950.1 Barley cytosol 42.34 16.76
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 41.61 16.47
OQU90772 Sorghum plastid 40.88 16.47
Zm00001d005239_P001 Maize plastid 41.61 16.43
EER96067 Sorghum plastid 43.07 16.3
TraesCS5B01G178800.1 Wheat mitochondrion, plastid 37.96 16.2
Zm00001d013021_P001 Maize plastid 39.42 16.02
TraesCS5A01G460000.1 Wheat plastid 40.88 15.95
TraesCS3A01G136200.1 Wheat mitochondrion 40.15 15.9
Os03t0358900-00 Rice cytosol 37.96 15.85
Os05t0311801-00 Rice cytosol 39.42 15.84
TraesCS5B01G469600.1 Wheat cytosol 40.15 15.67
TraesCS5D01G471100.1 Wheat cytosol 40.15 15.67
Zm00001d019171_P001 Maize plastid 41.61 15.66
Zm00001d040810_P001 Maize cytosol 40.15 15.62
PGSC0003DMT400015411 Potato cytosol 31.39 15.47
TraesCS3D01G137000.1 Wheat cytosol, plastid 39.42 15.43
Zm00001d003869_P001 Maize cytosol 35.77 15.22
Os03t0810100-01 Rice extracellular 39.42 15.13
TraesCS1B01G074400.1 Wheat cytosol, mitochondrion, plastid 35.77 15.03
EES02950 Sorghum cytosol 40.15 14.95
Os03t0356900-01 Rice extracellular 34.31 14.46
EES12063 Sorghum cytosol 35.77 14.41
Os07t0211700-00 Rice plastid 36.5 14.41
PGSC0003DMT400093314 Potato cytosol 30.66 13.25
HORVU1Hr1G011480.1 Barley cytosol, mitochondrion, plastid 37.23 13.01
TraesCS1A01G057000.1 Wheat cytosol 35.77 12.56
PGSC0003DMT400088765 Potato cytosol 27.01 12.54
PGSC0003DMT400088552 Potato cytosol 16.79 12.43
PGSC0003DMT400068271 Potato cytosol 32.12 11.61
PGSC0003DMT400096524 Potato cytosol, nucleus 89.05 10.98
PGSC0003DMT400088039 Potato cytosol 10.95 10.64
PGSC0003DMT400086709 Potato cytosol 19.71 10.59
PGSC0003DMT400087380 Potato cytosol 12.41 10.12
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 11.68 9.25
PGSC0003DMT400097056 Potato mitochondrion 7.3 8.55
PGSC0003DMT400085031 Potato cytosol 8.03 8.4
TraesCS1B01G323900.1 Wheat plastid 16.79 8.21
PGSC0003DMT400039795 Potato mitochondrion 18.25 5.56
PGSC0003DMT400092288 Potato cytosol 5.11 3.3
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 1.46 1.5
PGSC0003DMT400026622 Potato cytosol 0.0 0.0
PGSC0003DMT400086561 Potato cytosol 0.0 0.0
PGSC0003DMT400087375 Potato cytosol 0.0 0.0
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400088320EnsemblPlantsGene:PGSC0003DMG400037891Gene3D:1.10.287.890Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPTKEGG:00908+2.5.1.75PANTHER:PTHR11088
PANTHER:PTHR11088:SF49PFAM:PF01715PGSC:PGSC0003DMG400037891UniParc:UPI000294ACCCUniProt:M1DFQ1MapMan:50.2.5
Description
TRNA delta(2)-isopentenylpyrophosphate transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400037891]
Coordinates
chr00:-:26467397..26467958
Molecular Weight (calculated)
15895.2 Da
IEP (calculated)
5.035
GRAVY (calculated)
-0.290
Length
137 amino acids
Sequence
(BLAST)
001: MFKYKYGSCF IWIDVEQSVL NRRVDLRVDE MVNAGLVDEV RQIFIPDADF TKGILRSIGV PEMAKYLRKE KNIDGDDESK KMILQASISS IKRNTRILIC
101: NQLDKIQRLI NEKMWSVHHI IATAVFEDDT EEAVDES
Best Arabidopsis Sequence Match ( AT5G19040.1 )
(BLAST)
001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR
Arabidopsis Description
IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.