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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 3
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion, peroxisome, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040810_P001 Maize cytosol 64.52 62.5
HORVU3Hr1G025950.1 Barley cytosol 63.05 62.14
TraesCS3D01G137000.1 Wheat cytosol, plastid 63.34 61.71
Solyc11g063730.1.1 Tomato cytosol 8.8 61.22
Solyc11g019850.1.1 Tomato cytosol 9.68 61.11
TraesCS3B01G154100.1 Wheat cytosol, mitochondrion, plastid 61.88 60.98
TraesCS3A01G136200.1 Wheat mitochondrion 61.29 60.4
Solyc11g027990.1.1 Tomato cytosol 10.26 59.32
EES02950 Sorghum cytosol 63.05 58.42
Solyc11g061800.1.1 Tomato cytosol 8.5 58.0
Solyc08g061790.1.1 Tomato cytosol 10.26 56.45
Solyc11g019900.1.1 Tomato cytosol 9.68 55.93
Solyc11g019880.1.1 Tomato cytosol 19.06 53.72
Solyc11g063470.1.1 Tomato cytosol 8.5 53.7
Solyc11g061780.1.1 Tomato cytosol 8.5 52.73
Solyc11g020400.1.1 Tomato cytosol 17.3 52.21
Solyc11g061860.1.1 Tomato cytosol 20.82 51.08
Os03t0356900-01 Rice extracellular 47.21 49.54
PGSC0003DMT400097535 Potato mitochondrion 24.63 48.28
Os03t0358900-00 Rice cytosol 46.04 47.87
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 35.78 47.29
PGSC0003DMT400087375 Potato cytosol 11.44 46.99
PGSC0003DMT400085022 Potato cytosol 36.95 45.99
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 23.75 45.25
VIT_07s0104g00270.t01 Wine grape cytosol, mitochondrion, plastid 42.23 44.86
VIT_05s0020g02630.t01 Wine grape cytosol 43.4 44.85
Os07t0211700-00 Rice plastid 45.45 44.67
PGSC0003DMT400088950 Potato cytosol 27.86 44.6
PGSC0003DMT400086959 Potato cytosol 10.56 44.44
CDY02590 Canola cytosol 42.82 43.71
Os03t0810100-01 Rice extracellular 45.75 43.7
AT5G19040.1 Thale cress mitochondrion 42.23 43.64
Solyc11g061870.1.1 Tomato cytosol 26.1 43.63
Solyc11g063740.1.1 Tomato cytosol 26.1 43.63
PGSC0003DMT400097056 Potato mitochondrion 14.96 43.59
PGSC0003DMT400091323 Potato cytosol 18.77 43.54
PGSC0003DMT400092576 Potato cytosol 19.94 43.31
Bra023701.1-P Field mustard cytosol 41.94 43.2
CDY47191 Canola cytosol 41.94 43.2
Solyc11g063710.1.1 Tomato cytosol 25.51 42.65
CDY13945 Canola mitochondrion 41.64 42.52
Solyc11g020380.1.1 Tomato cytosol 24.63 42.42
PGSC0003DMT400097181 Potato cytosol 26.39 42.25
Bra002204.1-P Field mustard mitochondrion 41.35 42.22
CDX92563 Canola mitochondrion 41.35 42.22
Bra007728.1-P Field mustard plastid 41.06 42.17
CDY63340 Canola plastid 41.06 42.17
PGSC0003DMT400086561 Potato cytosol 12.61 42.16
PGSC0003DMT400092830 Potato cytosol 19.65 42.14
KRH67172 Soybean plastid 38.12 42.07
PGSC0003DMT400084902 Potato cytosol 21.7 42.05
Solyc11g019890.1.1 Tomato cytosol 25.22 41.95
VIT_09s0070g00710.t01 Wine grape mitochondrion 38.12 41.94
CDX93935 Canola plastid 41.06 41.92
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 27.27 41.89
Solyc11g061900.1.1 Tomato cytosol 24.05 41.62
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 13.78 41.59
CDY67797 Canola mitochondrion 40.47 41.57
PGSC0003DMT400087535 Potato cytosol 33.14 41.54
Solyc08g061680.1.1 Tomato cytosol, mitochondrion, nucleus 24.93 41.46
AT3G63110.1 Thale cress plastid 40.76 41.37
Bra040431.1-P Field mustard mitochondrion, plastid 40.47 41.32
CDX89173 Canola mitochondrion, plastid 40.47 41.32
PGSC0003DMT400091399 Potato cytosol 17.3 41.26
KRH02126 Soybean plastid 41.06 41.18
Solyc11g061890.1.1 Tomato cytosol 14.96 41.13
KRG95498 Soybean mitochondrion 37.24 40.97
Solyc11g063690.1.1 Tomato cytosol 19.06 40.88
Solyc11g061830.1.1 Tomato cytosol 24.34 40.69
Solyc11g061810.1.1 Tomato cytosol, mitochondrion, nucleus 21.41 40.56
KRH51017 Soybean plastid 39.88 40.48
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 19.94 40.48
KRH20915 Soybean cytosol 18.18 40.26
AT3G23630.1 Thale cress mitochondrion, plastid 38.71 40.12
PGSC0003DMT400086264 Potato cytosol 32.84 39.86
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 15.54 39.85
PGSC0003DMT400088770 Potato cytosol 18.18 39.74
PGSC0003DMT400088039 Potato cytosol 16.42 39.72
KRH11376 Soybean extracellular 39.59 39.47
CDX85119 Canola plastid 38.42 39.46
PGSC0003DMT400088320 Potato cytosol 15.84 39.42
PGSC0003DMT400088899 Potato cytosol 25.51 39.19
KRH71448 Soybean golgi, mitochondrion, plastid 37.54 39.14
PGSC0003DMT400097110 Potato cytosol 18.77 39.02
PGSC0003DMT400091271 Potato cytosol 14.37 38.89
Solyc09g064910.1.1 Tomato mitochondrion 35.78 38.85
CDX77492 Canola plastid 37.54 38.55
PGSC0003DMT400096405 Potato cytosol 18.77 38.55
PGSC0003DMT400087595 Potato cytosol 15.54 38.41
PGSC0003DMT400090073 Potato cytosol 27.27 38.27
Bra014968.1-P Field mustard plastid 37.24 38.25
PGSC0003DMT400088851 Potato cytosol 26.69 38.08
PGSC0003DMT400090908 Potato cytosol 25.22 37.72
PGSC0003DMT400002509 Potato mitochondrion 35.19 37.62
KRH31999 Soybean mitochondrion 37.83 37.5
Solyc08g061690.1.1 Tomato cytosol 21.41 36.87
PGSC0003DMT400089640 Potato mitochondrion 27.86 36.82
PGSC0003DMT400097346 Potato cytosol 14.37 36.57
Solyc01g080150.2.1 Tomato cytosol, extracellular, mitochondrion, plastid 35.19 36.47
Os07t0190150-00 Rice cytosol 24.93 36.17
PGSC0003DMT400083203 Potato cytosol 34.9 36.06
KRH01762 Soybean extracellular, golgi, vacuole 35.19 36.04
PGSC0003DMT400090690 Potato cytosol 14.66 35.97
Bra028326.1-P Field mustard plastid 31.67 35.88
KRH46921 Soybean cytosol 30.79 35.84
PGSC0003DMT400093701 Potato cytosol 26.1 35.74
Os01t0688300-00 Rice mitochondrion 35.19 35.71
PGSC0003DMT400090406 Potato cytosol 33.43 35.19
PGSC0003DMT400087380 Potato cytosol 17.3 35.12
PGSC0003DMT400095880 Potato cytosol 13.49 34.59
PGSC0003DMT400086310 Potato cytosol 12.02 33.61
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 19.35 33.5
CDY18104 Canola cytosol 27.57 33.22
Os05t0551700-01 Rice mitochondrion 34.31 32.5
PGSC0003DMT400088552 Potato cytosol 17.3 31.89
PGSC0003DMT400093491 Potato cytosol 22.58 31.43
PGSC0003DMT400089330 Potato cytosol 25.22 30.28
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 15.25 30.06
PGSC0003DMT400091817 Potato cytosol 12.9 28.95
PGSC0003DMT400090318 Potato cytosol 8.5 27.88
PGSC0003DMT400086337 Potato cytosol 24.05 27.7
PGSC0003DMT400085014 Potato cytosol 18.18 27.68
Solyc11g019860.1.1 Tomato cytoskeleton, cytosol 24.63 27.63
PGSC0003DMT400085031 Potato cytosol 10.26 26.72
PGSC0003DMT400094882 Potato cytosol 17.6 26.67
PGSC0003DMT400087085 Potato cytosol 23.17 26.51
PGSC0003DMT400085869 Potato cytosol 26.69 25.78
Os01t0968700-01 Rice cytosol 34.6 25.54
PGSC0003DMT400086709 Potato cytosol 19.06 25.49
PGSC0003DMT400090493 Potato cytosol 27.57 25.47
PGSC0003DMT400092288 Potato cytosol 15.54 25.0
PGSC0003DMT400095385 Potato cytosol 29.62 24.51
PGSC0003DMT400096448 Potato cytosol 7.33 24.04
PGSC0003DMT400088765 Potato cytosol 20.53 23.73
PGSC0003DMT400096037 Potato cytosol 6.74 22.77
PGSC0003DMT400093314 Potato cytosol 20.53 22.08
PGSC0003DMT400068836 Potato cytosol 12.9 22.0
PGSC0003DMT400093361 Potato cytosol 28.15 20.56
PGSC0003DMT400095744 Potato cytosol 9.68 18.33
PGSC0003DMT400026622 Potato cytosol 12.32 12.69
PGSC0003DMT400096524 Potato cytosol, nucleus 32.26 9.9
Protein Annotations
KEGG:00908+2.5.1.75Gene3D:1.10.287.890EntrezGene:107277295MapMan:11.4.1.1Gene3D:3.40.50.300EMBL:AB239799
ProteinID:BAS93296.1ProteinID:EEE63200.1GO:GO:0003674GO:GO:0003824GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016740InterPro:IPTHAMAP:MF_00185
EnsemblPlantsGene:Os05g0311801EnsemblPlants:Os05t0311801-00InterPro:P-loop_NTPasePFAM:PF01715PANTHER:PTHR11088PANTHER:PTHR11088:SF37
UniProt:Q33CD8SUPFAM:SSF52540UniParc:UPI00005DAD6BRefSeq:XP_015638866.1SEG:seg:
Description
Similar to Isopentenyl transferase IPT7. (Os05t0311801-00)
Coordinates
chr5:-:14261484..14262509
Molecular Weight (calculated)
36842.1 Da
IEP (calculated)
7.718
GRAVY (calculated)
-0.176
Length
341 amino acids
Sequence
(BLAST)
001: MEGSRGDKGK VVVVMGATAT GKSKLAIDLA LRFGGEVINS DKIQVHDGLD VVTNKVTDEE RAGVPHHLIG GVPPDADYGV DDFRRDAARA VASVLARGRV
101: PVIAGGSNRY LEALLDGEGG SFRERHELCF LWVDSRAPAL HRYVRHRVDR MVEQGLVGEV RGLFRLDDAD YSRGIRRSIG VPEMDAYLRQ EATGALLTHG
201: DKYKVALLAS AVGEIKANTW SLARRQLRKI HRLRGLPGWS LRRLDVTRVL ELKVEARSEA ECAAAWEADV IAPAAREVGM FLHGGGNVVE SGREEQPVVV
301: EKMEVAAVGG AGAAAAAEKW CGRRLLETTA AYHGMEAAAA V
Best Arabidopsis Sequence Match ( AT3G63110.1 )
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
Arabidopsis Description
IPT3IPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V8J2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.