Factsheet for Bra002204.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92563	Canola	mitochondrion	99.1	99.1
Bra023701.1-P	Field mustard	cytosol	88.32	89.12
AT5G19040.1	Thale cress	mitochondrion	87.43	88.48
Bra014968.1-P	Field mustard	plastid	55.09	55.42
VIT_05s0020g02630.t01	Wine grape	cytosol	52.99	53.64
Bra028326.1-P	Field mustard	plastid	46.41	51.49
GSMUA_AchrUn_...	Banana	cytosol	43.11	50.35
HORVU5Hr1G110100.1	Barley	mitochondrion	45.51	50.33
KRH11376	Soybean	extracellular	49.7	48.54
KRH02126	Soybean	plastid	48.8	47.94
KRH51017	Soybean	plastid	48.2	47.92
Bra040431.1-P	Field mustard	mitochondrion, plastid	47.6	47.6
Bra007728.1-P	Field mustard	plastid	47.31	47.59
Zm00001d034584_P001	Maize	plastid	45.51	46.2
OQU90772	Sorghum	plastid	46.11	45.29
Solyc01g080150.2.1	Tomato	cytosol, extracellular, mitochondrion, plastid	44.61	45.29
PGSC0003DMT400083203	Potato	cytosol	44.31	44.85
Zm00001d013021_P001	Maize	plastid	44.91	44.51
TraesCS5A01G460000.1	Wheat	plastid	46.41	44.16
Os03t0810100-01	Rice	extracellular	46.71	43.7
KRH20915	Soybean	cytosol	20.06	43.51
EER96067	Sorghum	plastid	46.71	43.09
TraesCS5D01G471100.1	Wheat	cytosol	45.21	43.02
Zm00001d040810_P001	Maize	cytosol	45.21	42.9
Zm00001d019171_P001	Maize	plastid	46.71	42.86
TraesCS5A01G181100.1	Wheat	mitochondrion	37.43	42.81
TraesCS5B01G469600.1	Wheat	cytosol	44.91	42.73
Zm00001d005239_P001	Maize	plastid	44.31	42.65
Os07t0211700-00	Rice	plastid	44.01	42.36
HORVU5Hr1G055220.1	Barley	cytosol, mitochondrion	37.13	42.32
HORVU5Hr1G055240.1	Barley	cytosol, mitochondrion	37.13	42.32
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	43.41	41.91
Os05t0311801-00	Rice	cytosol	42.22	41.35
TraesCS3D01G137000.1	Wheat	cytosol, plastid	43.11	41.14
TraesCS3A01G136200.1	Wheat	mitochondrion	42.22	40.75
HORVU3Hr1G025950.1	Barley	cytosol	42.22	40.75
EES02950	Sorghum	cytosol	44.61	40.49
Os03t0356900-01	Rice	extracellular	38.62	39.69
Os03t0358900-00	Rice	cytosol	38.92	39.63
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	38.62	39.57
Zm00001d003869_P001	Maize	cytosol	37.72	39.13
GSMUA_AchrUn_...	Banana	mitochondrion	40.12	38.4
TraesCS5D01G185500.1	Wheat	plastid	36.83	38.32
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	36.53	38.01
EES12063	Sorghum	cytosol	37.72	37.06
Bra037537.1-P	Field mustard	plastid	34.73	35.8
Bra004037.1-P	Field mustard	plastid	35.33	35.44
TraesCS1B01G323900.1	Wheat	plastid	29.64	35.36
Bra001737.1-P	Field mustard	plastid	34.13	34.86
HORVU1Hr1G011480.1	Barley	cytosol, mitochondrion, plastid	40.72	34.69
TraesCS1A01G057000.1	Wheat	cytosol	40.42	34.62
Bra033933.1-P	Field mustard	plastid	36.83	33.79
Bra034366.1-P	Field mustard	cytosol	33.23	23.97
Bra006535.1-P	Field mustard	plastid	21.56	15.55
Bra020081.1-P	Field mustard	plastid	21.56	15.52

Protein Annotations

EnsemblPlants:Bra002204.1	EnsemblPlants:Bra002204.1-P	EnsemblPlantsGene:Bra002204	Gene3D:1.10.287.890	Gene3D:3.40.50.300	GO:GO:0006139
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	InterPro:P-loop_NTPase
KEGG:00908+2.5.1.75	PANTHER:PTHR11088	PANTHER:PTHR11088:SF49	PFAM:PF01715	SEG:seg	SUPFAM:SSF52540
UniParc:UPI000254535B	UniProt:M4CDC3	MapMan:11.4.1.1	:	:	:

Description

AT5G19040 (E=4e-160) ATIPT5, IPT5 | IPT5; ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups

Coordinates

chrA10:+:10924841..10925845

Molecular Weight (calculated)

37888.7 Da

IEP (calculated)

6.784

GRAVY (calculated)

-0.236

Length

334 amino acids

Sequence
(BLAST)

001: MKPCMTNLRQ MIQPMLNFQG ISAGLNMVDV PFFRPKDKVV FVMGATGTGK SRLAIDLATR FPAEIVNSDK IQVYKGLDIV TNKVTPEESL GVPHHLLGTV
101: ENTHEDFTAE DYQREALRAV KSIVERDRVP IIAGGSNSYI EALVNNCVDF RLRYKCCFLW VDVDRPVLNS FVSDRVDKMV EMGLVDEVRR IFDPSSSDYS
201: SGIRRAIAVP ELDEFLRAEK RDYPAEVTGK LLETAIKKIK ENNCLLACRQ YQKIKRLYKQ WKWNMHRIDA TEVFLRRGEE ADEAWENMVA RPSALAVNRF
301: LNYSDDHHLE GADILLPEIS AVPPLPAAVA AISR

Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)

001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR

Arabidopsis Description

IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.