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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005239_P001 Maize plastid 84.25 87.9
Zm00001d019171_P001 Maize plastid 84.81 84.34
Os07t0211700-00 Rice plastid 66.02 68.88
Solyc11g019850.1.1 Tomato cytosol 9.94 66.67
Solyc11g061800.1.1 Tomato cytosol 9.12 66.0
OQU90772 Sorghum plastid 61.6 65.59
Solyc11g063730.1.1 Tomato cytosol 8.84 65.31
Solyc08g061790.1.1 Tomato cytosol 10.77 62.9
Solyc11g027990.1.1 Tomato cytosol 10.22 62.71
Solyc11g019900.1.1 Tomato cytosol 9.12 55.93
Solyc11g063470.1.1 Tomato cytosol 8.29 55.56
Solyc11g061780.1.1 Tomato cytosol 8.29 54.55
Solyc11g020400.1.1 Tomato cytosol 16.85 53.98
Solyc11g019880.1.1 Tomato cytosol 17.96 53.72
PGSC0003DMT400091323 Potato cytosol 21.27 52.38
Solyc11g061860.1.1 Tomato cytosol 19.61 51.08
AT5G19040.1 Thale cress mitochondrion 46.13 50.61
PGSC0003DMT400087375 Potato cytosol 11.6 50.6
PGSC0003DMT400091824 Potato cytosol, mitochondrion, nucleus 24.86 50.28
PGSC0003DMT400088950 Potato cytosol 29.56 50.23
PGSC0003DMT400097056 Potato mitochondrion 16.02 49.57
VIT_08s0040g01010.t01 Wine grape cytosol, nucleus, plastid 35.08 49.22
PGSC0003DMT400087535 Potato cytosol 36.19 48.16
Solyc11g063740.1.1 Tomato cytosol 27.07 48.04
KRH67172 Soybean plastid 40.88 47.9
CDY47191 Canola cytosol 43.37 47.43
VIT_05s0020g02630.t01 Wine grape cytosol 43.09 47.27
Bra023701.1-P Field mustard cytosol 43.09 47.13
PGSC0003DMT400086561 Potato cytosol 13.26 47.06
Solyc11g061870.1.1 Tomato cytosol 26.52 47.06
VIT_07s0104g00270.t01 Wine grape cytosol, mitochondrion, plastid 41.71 47.04
CDX92563 Canola mitochondrion 43.37 47.01
PGSC0003DMT400090456 Potato cytosol, mitochondrion, plastid 14.64 46.9
PGSC0003DMT400085022 Potato cytosol 35.36 46.72
Bra002204.1-P Field mustard mitochondrion 43.09 46.71
PGSC0003DMT400097535 Potato mitochondrion 22.38 46.55
CDY02590 Canola cytosol 42.82 46.41
CDY13945 Canola mitochondrion 42.82 46.41
PGSC0003DMT400088039 Potato cytosol 17.96 46.1
Solyc11g063690.1.1 Tomato cytosol 20.17 45.91
PGSC0003DMT400092576 Potato cytosol 19.89 45.86
Bra040431.1-P Field mustard mitochondrion, plastid 42.27 45.81
CDX89173 Canola mitochondrion, plastid 42.27 45.81
KRG95498 Soybean mitochondrion 39.23 45.81
Solyc11g061900.1.1 Tomato cytosol 24.86 45.69
Solyc11g063710.1.1 Tomato cytosol 25.69 45.59
CDX93935 Canola plastid 41.99 45.51
Solyc11g020380.1.1 Tomato cytosol 24.86 45.45
AT3G63110.1 Thale cress plastid 41.99 45.24
Solyc11g061830.1.1 Tomato cytosol 25.41 45.1
Solyc11g061810.1.1 Tomato cytosol, mitochondrion, nucleus 22.38 45.0
PGSC0003DMT400084902 Potato cytosol 21.82 44.89
Bra007728.1-P Field mustard plastid 41.16 44.88
CDY63340 Canola plastid 41.16 44.88
CDY67797 Canola mitochondrion 41.16 44.88
PGSC0003DMT400085545 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 20.72 44.64
PGSC0003DMT400097181 Potato cytosol 26.24 44.6
VIT_09s0070g00710.t01 Wine grape mitochondrion 38.12 44.52
PGSC0003DMT400097110 Potato cytosol 20.17 44.51
PGSC0003DMT400094689 Potato cytosol, mitochondrion, peroxisome 27.07 44.14
PGSC0003DMT400086264 Potato cytosol 34.25 44.13
PGSC0003DMT400091399 Potato cytosol 17.4 44.06
PGSC0003DMT400092830 Potato cytosol 19.34 44.03
EES12063 Sorghum cytosol 41.16 43.82
PGSC0003DMT400094329 Potato cytosol, mitochondrion, nucleus 16.02 43.61
PGSC0003DMT400090908 Potato cytosol 27.35 43.42
Solyc08g061680.1.1 Tomato cytosol, mitochondrion, nucleus 24.59 43.41
PGSC0003DMT400088320 Potato cytosol 16.3 43.07
PGSC0003DMT400091271 Potato cytosol 14.92 42.86
AT3G23630.1 Thale cress mitochondrion, plastid 38.67 42.55
CDX77492 Canola plastid 38.95 42.47
CDX85119 Canola plastid 38.95 42.47
Solyc11g019890.1.1 Tomato cytosol 24.03 42.44
EES02950 Sorghum cytosol 43.09 42.39
PGSC0003DMT400088899 Potato cytosol 25.97 42.34
PGSC0003DMT400088851 Potato cytosol 27.9 42.26
KRH71448 Soybean golgi, mitochondrion, plastid 38.12 42.2
Bra014968.1-P Field mustard plastid 38.67 42.17
PGSC0003DMT400096405 Potato cytosol 19.34 42.17
PGSC0003DMT400002509 Potato mitochondrion 37.02 42.01
PGSC0003DMT400089640 Potato mitochondrion 29.83 41.86
Solyc09g064910.1.1 Tomato mitochondrion 36.19 41.72
PGSC0003DMT400088770 Potato cytosol 17.96 41.67
KRH51017 Soybean plastid 38.4 41.37
KRH02126 Soybean plastid 38.4 40.88
PGSC0003DMT400086959 Potato cytosol 9.12 40.74
PGSC0003DMT400090073 Potato cytosol 27.35 40.74
Solyc01g080150.2.1 Tomato cytosol, extracellular, mitochondrion, plastid 36.74 40.43
KRH31999 Soybean mitochondrion 38.4 40.41
Solyc08g061690.1.1 Tomato cytosol 22.1 40.4
KRH11376 Soybean extracellular 38.12 40.35
Solyc11g061890.1.1 Tomato cytosol 13.81 40.32
Bra028326.1-P Field mustard plastid 33.15 39.87
PGSC0003DMT400090406 Potato cytosol 35.36 39.51
PGSC0003DMT400086310 Potato cytosol 13.26 39.34
PGSC0003DMT400093770 Potato cytosol, mitochondrion, plastid 21.27 39.09
PGSC0003DMT400097346 Potato cytosol 14.36 38.81
PGSC0003DMT400083203 Potato cytosol 35.36 38.79
PGSC0003DMT400093491 Potato cytosol 26.24 38.78
PGSC0003DMT400093701 Potato cytosol 26.52 38.55
PGSC0003DMT400087595 Potato cytosol 14.64 38.41
PGSC0003DMT400087380 Potato cytosol 17.4 37.5
CDY18104 Canola cytosol 29.01 37.1
PGSC0003DMT400095880 Potato cytosol 13.54 36.84
KRH01762 Soybean extracellular, golgi, vacuole 33.7 36.64
KRH20915 Soybean cytosol 15.47 36.36
PGSC0003DMT400090690 Potato cytosol 13.81 35.97
KRH46921 Soybean cytosol 28.73 35.49
PGSC0003DMT400096037 Potato cytosol 9.67 34.65
PGSC0003DMT400088552 Potato cytosol 17.68 34.59
KXG33157 Sorghum mitochondrion, plastid 35.64 34.49
PGSC0003DMT400089330 Potato cytosol 26.8 34.15
PGSC0003DMT400090318 Potato cytosol 9.67 33.65
PGSC0003DMT400091817 Potato cytosol 14.09 33.55
PGSC0003DMT400096448 Potato cytosol 9.39 32.69
KXG22495 Sorghum mitochondrion 34.53 32.13
PGSC0003DMT400086337 Potato cytosol 25.41 31.08
PGSC0003DMT400068919 Potato cytosol, mitochondrion, nucleus 14.64 30.64
PGSC0003DMT400087085 Potato cytosol 24.86 30.2
PGSC0003DMT400085014 Potato cytosol 18.23 29.46
Solyc11g019860.1.1 Tomato cytoskeleton, cytosol 24.59 29.28
PGSC0003DMT400095385 Potato cytosol 32.6 28.64
PGSC0003DMT400094882 Potato cytosol 17.4 28.0
PGSC0003DMT400092288 Potato cytosol 16.3 27.83
EES02135 Sorghum cytosol, plastid 35.08 27.08
PGSC0003DMT400085031 Potato cytosol 9.67 26.72
PGSC0003DMT400086709 Potato cytosol 18.78 26.67
PGSC0003DMT400085869 Potato cytosol 25.69 26.35
PGSC0003DMT400090493 Potato cytosol 26.8 26.29
PGSC0003DMT400068836 Potato cytosol 14.09 25.5
PGSC0003DMT400095744 Potato cytosol 12.43 25.0
PGSC0003DMT400093314 Potato cytosol 21.82 24.92
PGSC0003DMT400088765 Potato cytosol 19.06 23.39
PGSC0003DMT400093361 Potato cytosol 29.01 22.48
KXG36879 Sorghum mitochondrion 23.76 19.33
OQU77179 Sorghum mitochondrion 23.48 16.83
PGSC0003DMT400026622 Potato cytosol 12.15 13.29
PGSC0003DMT400096524 Potato cytosol, nucleus 35.64 11.61
Protein Annotations
EnsemblPlants:EER96067EnsemblPlantsGene:SORBI_3002G076700Gene3D:1.10.287.890Gene3D:3.40.50.300GO:GO:0006139GO:GO:0008033
GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPTInterPro:P-loop_NTPaseKEGG:00908+2.5.1.75
MetaCyc:PWY-2781PANTHER:PTHR11088PANTHER:PTHR11088:SF36PFAM:PF01715ProteinID:EER96067ProteinID:EER96067.2
SEG:segSUPFAM:SSF52540UniParc:UPI00081AC375UniProt:C5XDB4MapMan:11.4.1.1:
Description
hypothetical protein
Coordinates
chr2:+:7992007..7993782
Molecular Weight (calculated)
39090.5 Da
IEP (calculated)
7.473
GRAVY (calculated)
-0.215
Length
362 amino acids
Sequence
(BLAST)
001: MSLYLAPTAT AATTLPIRQL VAPPPPPSSI NLRQLERGMA LPLPPAPPPP PLVSSASNRH VGAKHKAVMV MGATGTGKSR LAVDLALQFG GEVINSDKIQ
101: VHAGLEVTTN KVTEEERAGV PHHLLGVARP DEEFTAADFR REASRAACAI TARGRVPIIA GGSNSYVEEL VDGDRHAFRD RYDCCFLWVD VQRAVLHGYV
201: ARRVDEMCAR GLVDEVAAAF DPRRTDYSRG IWRAIGAPEL DAYLRWSGDE GDGDGDGERA RLLAAAIEDI KSNTRRLSCR QRAKIQRLAK LWGCAVRRVD
301: ATEVFRRRGD DADEAWQRLV AAPCIDAVRS FLRNDDAAAA NDLPAAELVP VFAPAPAAAV AG
Best Arabidopsis Sequence Match ( AT5G19040.3 )
(BLAST)
001: MKPCMTALRQ VIQPLSLNFQ GNMVDVPFFR RKDKVVFVMG ATGTGKSRLA IDLATRFPAE IVNSDKIQVY KGLDIVTNKV TPEESLGVPH HLLGTVHDTY
101: EDFTAEDFQR EAIRAVESIV QRDRVPIIAG GSNSYIEALV NDCVDFRLRY NCCFLWVDVS RPVLHSFVSE RVDKMVDMGL VDEVRRIFDP SSSDYSAGIR
201: RAIGVPELDE FLRSEMRNYP AETTERLLET AIEKIKENTC LLACRQLQKI QRLYKQWKWN MHRVDATEVF LRRGEEADEA WDNSVAHPSA LAVEKFLSYS
301: DDHHLEGANI LLPEISAVPP LPAAVAAISR
Arabidopsis Description
IPT5Adenylate isopentenyltransferase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94ID2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.