CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77179	Sorghum	mitochondrion	82.7	72.87
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	74.16	72.69
TraesCS7A01G560300.1	Wheat	mitochondrion	73.48	72.19
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	72.58	71.46
HORVU7Hr1G120070.12	Barley	mitochondrion	73.48	67.28
GSMUA_Achr1P06960_001	Banana	cytosol	34.16	61.04
VIT_19s0014g01630.t01	Wine grape	mitochondrion	52.36	58.84
CDY45111	Canola	plastid	27.19	55.0
KRH21996	Soybean	mitochondrion	54.83	54.46
PGSC0003DMT400039795	Potato	mitochondrion	54.16	53.56
Solyc12g014190.1.1	Tomato	mitochondrion	53.03	52.56
CDX70907	Canola	plastid	53.71	51.62
Bra006535.1-P	Field mustard	plastid	53.71	51.62
CDX88863	Canola	plastid	53.48	51.4
Bra020081.1-P	Field mustard	plastid	52.36	50.22
AT5G20040.3	Thale cress	mitochondrion	52.81	50.11
OQU90772	Sorghum	plastid	19.33	25.29
EER96067	Sorghum	plastid	19.33	23.76
EES02950	Sorghum	cytosol	17.98	21.74
EES12063	Sorghum	cytosol	16.4	21.47
EES02135	Sorghum	cytosol, plastid	20.67	19.62
KXG33157	Sorghum	mitochondrion, plastid	15.96	18.98
KXG22495	Sorghum	mitochondrion	15.96	18.25

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.40.50.300	MapMan:50.2.5	UniProt:A0A1B6QG61	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:IPT	EnsemblPlants:KXG36879
ProteinID:KXG36879	ProteinID:KXG36879.1	HAMAP:MF_00185	InterPro:P-loop_NTPase	PFAM:PF01715	PANTHER:PTHR11088
PANTHER:PTHR11088:SF50	MetaCyc:PWY-2781	EnsemblPlantsGene:SORBI_3002G407800	SUPFAM:SSF52540	TIGRFAMs:TIGR00174	UniParc:UPI00081AD2FA

Description

hypothetical protein

Coordinates

chr2:-:75671625..75675328

Molecular Weight (calculated)

50261.0 Da

IEP (calculated)

8.204

GRAVY (calculated)

-0.339

Length

445 amino acids

Sequence
(BLAST)

001: MCCEMRPQLG AVRRAVWTTW PVLCSQNRSP SSFRSAKKIT VAATASLAPN HQRKKDMVIV ISGPTGAGKS RLALEVARRL GGEIISADSV QVYRGLDVGS
101: AKPSATEMGM VPHHLIDILH ASDDYSVGAF FRDARRATQD VLDRGRVPVV AGGTGLYLRW YMYGKPNVPQ SSMDITSAVW SELVSFRESG QWEEAVELVV
201: RAGDPKARDL SVNNWKRLSR SLEVIRSSGS PPSAFTLPYN TFCEQHDTEV SAGGSCEARN MDYDFFCIFL ACPRLELYRS IDLRCEEMLV DTCGLLSEAS
301: WLLDIGLHPH VNSATRAIGY KQAMEYLMHC RQNGGESTTQ EFLEFLAKFK STSRNFARRQ ITWFRNEKIY QWVNASQPFE VIVQFICDAY HGCSPRMVPE
401: SLEMKRESCM LESRDLKTYR SENRVFRGDD DCSHVLNWIR RTQGK

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.