Factsheet for TraesCS7B01G486700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G560300.1	Wheat	mitochondrion	93.58	93.38
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	93.36	92.95
HORVU7Hr1G120070.12	Barley	mitochondrion	92.26	85.8
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	66.59	73.59
KXG36879	Sorghum	mitochondrion	71.46	72.58
OQU77179	Sorghum	mitochondrion	71.02	63.56
GSMUA_Achr1P06960_001	Banana	cytosol	33.41	60.64
VIT_19s0014g01630.t01	Wine grape	mitochondrion	50.22	57.32
PGSC0003DMT400039795	Potato	mitochondrion	53.98	54.22
Solyc12g014190.1.1	Tomato	mitochondrion	52.88	53.23
KRH21996	Soybean	mitochondrion	51.55	52.01
CDX70907	Canola	plastid	52.21	50.97
Bra006535.1-P	Field mustard	plastid	52.21	50.97
CDX88863	Canola	plastid	51.77	50.54
CDY45111	Canola	plastid	24.56	50.45
AT5G20040.3	Thale cress	mitochondrion	51.55	49.68
Bra020081.1-P	Field mustard	plastid	49.78	48.49
TraesCS5B01G469600.1	Wheat	cytosol	19.25	24.79
TraesCS1B01G074400.1	Wheat	cytosol, mitochondrion, plastid	17.7	24.54
TraesCS1B01G323900.1	Wheat	plastid	13.94	22.5
TraesCS3B01G296500.1	Wheat	plastid	17.92	22.25
TraesCS5B01G178800.1	Wheat	mitochondrion, plastid	15.71	22.12
TraesCS3B01G154100.1	Wheat	cytosol, mitochondrion, plastid	15.71	20.52
TraesCS2B01G276300.2	Wheat	plastid	21.02	20.39
TraesCS1B01G396700.1	Wheat	plastid	14.6	19.08

Protein Annotations

KEGG:00908+2.5.1.75	Gene3D:1.10.20.140	Gene3D:3.40.50.300	MapMan:50.2.5	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	InterPro:IPT	HAMAP:MF_00185	InterPro:P-loop_NTPase
PFAM:PF01715	PANTHER:PTHR11088	PANTHER:PTHR11088:SF50	SUPFAM:SSF52540	TIGRFAMs:TIGR00174	EnsemblPlantsGene:TraesCS7B01G486700
EnsemblPlants:TraesCS7B01G486700.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:742575796..742577154

Molecular Weight (calculated)

50752.3 Da

IEP (calculated)

6.771

GRAVY (calculated)

-0.343

Length

452 amino acids

Sequence
(BLAST)

001: MCCEMRPGFG FGSAQRGIWR SWPALCSRQQ RFTASLGSAK KLHVMAATMP APSEARKKSK VIVISGPTGA GKSRLALEVA RRLGGEIISA DSVQVYRSLD
101: VGSAKPTASE MSMVPHHLID IMHACDDYSA GMFFHDARTA TQDVLGRGSV PVVAGGTGLY LRWFIYGKPN VPQSSSDVIS SVWSELAGFR DSGRWEEAVE
201: LLLKAGDPEA RDLDTNNWAR LSRRLEIIRS SGSPASAFTL PYSSFQKQQD TKLIDSPSDD AISEVKELEY DFLCFFLACP RVELYRSIDL RCEEMLADTG
301: GLLSEASWLL DIGLQPNMNS ATRAIGYRQT MEYLLHCRQN GGSSSPEEFL EFLTKFQQTS RNFSRRQMTW FRNEKIYQWV DASQPFEEIV QFICDAYNGS
401: DAMVLPESLE MKRESCVHTS KDLKTYRSEN KVFLGHEECC HVLDWIRRTQ GK

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.