Factsheet for TraesCS7A01G560300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G549300.1	Wheat	mitochondrion, plastid	94.26	94.05
TraesCS7B01G486700.1	Wheat	mitochondrion, plastid	93.38	93.58
HORVU7Hr1G120070.12	Barley	mitochondrion	91.39	85.19
Zm00001d036339_P001	Maize	cytosol, mitochondrion, nucleus, plastid	66.67	73.84
KXG36879	Sorghum	mitochondrion	72.19	73.48
OQU77179	Sorghum	mitochondrion	71.3	63.96
GSMUA_Achr1P06960_001	Banana	cytosol	32.45	59.04
VIT_19s0014g01630.t01	Wine grape	mitochondrion	50.99	58.33
PGSC0003DMT400039795	Potato	mitochondrion	53.86	54.22
Solyc12g014190.1.1	Tomato	mitochondrion	52.76	53.23
KRH21996	Soybean	mitochondrion	52.1	52.68
CDX70907	Canola	plastid	53.2	52.05
Bra006535.1-P	Field mustard	plastid	53.2	52.05
CDY45111	Canola	plastid	25.17	51.82
CDX88863	Canola	plastid	52.76	51.62
AT5G20040.3	Thale cress	mitochondrion	51.43	49.68
Bra020081.1-P	Field mustard	plastid	50.77	49.57
TraesCS5A01G181100.1	Wheat	mitochondrion	16.11	25.0
TraesCS5A01G460000.1	Wheat	plastid	19.21	24.79
TraesCS3A01G263300.1	Wheat	mitochondrion, plastid	17.88	21.95
TraesCS2A01G265700.1	Wheat	plastid	19.65	20.6
TraesCS1A01G057000.1	Wheat	cytosol	17.22	20.0
TraesCS3A01G136200.1	Wheat	mitochondrion	15.23	19.94
TraesCS1A01G376300.1	Wheat	plastid	15.89	18.32

Protein Annotations

EnsemblPlants:TraesCS7A01G560300.1	EnsemblPlantsGene:TraesCS7A01G560300	Gene3D:1.10.20.140	Gene3D:3.40.50.300	GO:GO:0006139	GO:GO:0008033
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	HAMAP:MF_00185	InterPro:IPT	InterPro:P-loop_NTPase
KEGG:00908+2.5.1.75	PANTHER:PTHR11088	PANTHER:PTHR11088:SF50	PFAM:PF01715	SEG:seg	SUPFAM:SSF52540
TIGRFAMs:TIGR00174	MapMan:50.2.5	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:732081413..732082774

Molecular Weight (calculated)

50990.5 Da

IEP (calculated)

6.951

GRAVY (calculated)

-0.369

Length

453 amino acids

Sequence
(BLAST)

001: MCCEMRPGFG FGSARRGVWR SWPALCSRQL QQCFSPSLRS AKKLHVTATT LPLPDARKKS KVIVISGPTG AGKSRLALEV ARRLGGEIIS ADSVQVYRSL
101: DVGSAKPSAS EMSMVPHHLI DIMHACDDYS AGMFFHDARA ATQDVLGRGS VPVVAGGTGL YLRWFIYGKP NVPQSSTDII SSVWSELAGF RESGRWEEAV
201: ELLLKAGDPE ARDLDTNNWA RLSRRLEIIR SSGSPASSFT LPYSSFQKQQ DTKLTDSPSD DATCEAKELE YDFLCFFLAC PRVELYRSID LRCEEMLADT
301: GGLLSEASWL LDVGLQPNMN SATRAIGYRQ TMEYLVHCRQ NGGSSSPEEF LEFLTKFQQT SRNFSRRQMT WFRNEKIYQW VDASQPFEEI VQFICDAYNG
401: SDAMVLPESL EMKRESCVHT SKDLKTYRPE NRVFLGHEEC CHILDWIRRT QGK

Best Arabidopsis Sequence Match ( AT5G20040.1 )
(BLAST)

001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQAME YLLQCRRYEG ESSPREFYAF LNKFQTASRN FAKRQMTWFR CEPMYHWLNA SKPLDSILQC IYDAYESEAE
401: MVEIPESLRM SKDVRDSREA SELKGYRSKN RHFVRREDCS SVLEWIRSEG CKSEASCVES AIA

Arabidopsis Description

ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.