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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45111 Canola plastid 39.23 83.64
CDX70907 Canola plastid 80.81 81.86
Bra020081.1-P Field mustard plastid 80.6 81.47
CDX88863 Canola plastid 80.38 81.43
Bra006535.1-P Field mustard plastid 79.53 80.56
VIT_19s0014g01630.t01 Wine grape mitochondrion 56.5 66.92
PGSC0003DMT400039795 Potato mitochondrion 60.77 63.33
Solyc12g014190.1.1 Tomato mitochondrion 59.91 62.58
KRH21996 Soybean mitochondrion 59.06 61.83
GSMUA_Achr1P06960_001 Banana cytosol 30.06 56.63
Zm00001d036339_P001 Maize cytosol, mitochondrion, nucleus, plastid 48.19 55.26
KXG36879 Sorghum mitochondrion 50.11 52.81
TraesCS7B01G486700.1 Wheat mitochondrion, plastid 49.68 51.55
TraesCS7D01G549300.1 Wheat mitochondrion, plastid 49.89 51.54
TraesCS7A01G560300.1 Wheat mitochondrion 49.68 51.43
HORVU7Hr1G120070.12 Barley mitochondrion 49.68 47.94
OQU77179 Sorghum mitochondrion 49.68 46.14
AT5G19040.1 Thale cress mitochondrion 15.99 22.73
AT3G19160.1 Thale cress plastid 15.99 22.73
AT3G23630.1 Thale cress mitochondrion, plastid 15.78 22.49
AT1G68460.1 Thale cress plastid 17.06 22.41
AT3G63110.1 Thale cress plastid 15.56 21.73
AT4G24650.1 Thale cress cytosol 13.01 19.18
AT1G25410.1 Thale cress plastid 13.43 18.42
AT2G27760.1 Thale cress cytosol 16.84 16.95
Protein Annotations
KEGG:00908+2.5.1.75Gene3D:1.10.20.140Gene3D:3.40.50.300MapMan:50.2.5EntrezGene:832126ProteinID:AED92784.1
ArrayExpress:AT5G20040EnsemblPlantsGene:AT5G20040RefSeq:AT5G20040TAIR:AT5G20040RefSeq:AT5G20040-TAIR-GEnsemblPlants:AT5G20040.3
TAIR:AT5G20040.3Symbol:ATIPT9Unigene:At.19013UniProt:F4K2Q7GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0006139GO:GO:0008033GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016740InterPro:IPTSymbol:IPT9HAMAP:MF_00185
RefSeq:NP_001190344.1InterPro:P-loop_NTPasePFAM:PF01715PO:PO:0000013PO:PO:0000037PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007057
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020137
PO:PO:0025022PANTHER:PTHR11088PANTHER:PTHR11088:SF50SUPFAM:SSF52540TIGRFAMs:TIGR00174UniParc:UPI0001E93112
SEG:seg:::::
Description
ATIPT9Isopentenyltransferase 9 [Source:UniProtKB/TrEMBL;Acc:F4K2Q7]
Coordinates
chr5:-:6767802..6771190
Molecular Weight (calculated)
52924.9 Da
IEP (calculated)
7.334
GRAVY (calculated)
-0.379
Length
469 amino acids
Sequence
(BLAST)
001: MVIGSGVFLT RTCYLRLQPP SLVLRRRFCA ATTACSVPLN GNKKKKSEKE KVIVISGPTG AGKSRLAMEL AKRLNGEIIS ADSVQVYKGL DVGSAKPSDS
101: DRKVVPHHLI DILHPSQDYS VGQFYDDGRQ ATKDILNRGR VPIVTGGTGL YLRWFMYGKP DVPKPSPEVI AEAHDMLVGF QTEYNWDAAV ELVVNAGDPK
201: ASSLPRNDWY RLRRSLEILK STGSPPSSFR IPYDSFRVNL VAPDADDFLE DGSSADISIQ NIETDLDYDF LCFFLSSPRV ALYRSIDFRC EDMLSGPNGV
301: LSEARWLLDL GLLPNSNPAT RAIGYRQVNS LFPAMEYLLQ CRRYEGESSP REFYAFLNKF QTASRNFAKR QMTWFRCEPM YHWLNASKPL DSILQCIYDA
401: YESEAEMVEI PESLRMSKDV RDSREASELK GYRSKNRHFV RREDCSSVLE WIRSEGCKSE ASCVESAIA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.